YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Mass Spectrometry Run

Run Information:


Bait Protein: ZDS1
Organism: Saccharomyces cerevisiae
Publication: McCusker D, Denison C, Anderson S, Egelhofer TA, Yates JR 3rd, Gygi SP, Kellogg DR. Cdk1 coordinates cell-surface growth with the cell cycle.Nat Cell Biol. 2007 May;9(5):506-15.
Comments: Sample 2- cpn2 from june 2005

Raw Data:
Download DTASelect Filter text
Download DTASelect HTML file

FILTERED Run Results: [unfilter]

[View our MS interpretation guidelines.]
  Hit Protein Protein Desc Sequence Count Spectrum Count Sequence Coverage NSAF Mol. Wt.
[View Peptides]   CLN2 G1 cyclin involved in regulation of the cell cycle; activates Cdc28p kinase to promote the G1 to S p... 61 455 87.2% 0.0604 61697
[View Peptides]   CDC28 Catalytic subunit of the main cell cycle cyclin-dependent kinase (CDK); alternately associates with ... 45 323 80.5% 0.0784 34061
[View Peptides]   gi|159164567, gi... gi|66360349|pdb|1WR1|A Chain A, The Complex Sturcture Of Dsk2p Uba With Ubiquitin, gi|48429170|sp|P6... 5 16 60.5% 0.0152 8557
[View Peptides]   RPP2A Ribosomal protein P2 alpha, a component of the ribosomal stalk, which is involved in the interaction... 5 30 57.5% 0.0205 10746
[View Peptides]   HS71_YEAST, HSP7... (P10591) Heat shock protein SSA1 (Heat shock protein YG100), (P10591) Heat shock protein SSA1 (Heat ... 56 535 56.8% 0.0603 69526
[View Peptides]   SEC28 Epsilon-COP subunit of the coatomer; regulates retrograde Golgi-to-ER protein traffic; stabilizes Co... 12 19 56.4% 0.00464 33829
[View Peptides]   HSP72_YEAST, HS7... (P10592) Heat shock protein SSA2, (P10592) Heat shock protein SSA2 46 368 55.6% 0.0417 69339
[View Peptides]   RPP2B Ribosomal protein P2 beta, a component of the ribosomal stalk, which is involved in the interaction ... 6 14 53.6% 0.0092 11050
[View Peptides]   HSP76_YEAST, HS7... (P40150) Heat shock protein SSB2, (P40150) Heat shock protein SSB2 34 143 50.7% 0.0169 66463
[View Peptides]   HS75_YEAST, HSP7... (P11484) Heat shock protein SSB1 (Cold-inducible protein YG101), (P11484) Heat shock protein SSB1 (C... 33 148 47.9% 0.0175 66470
[View Peptides]   TIF34 eIF3i subunit of the core complex of translation initiation factor 3 (eIF3), which is essential for ... 10 17 46.1% 0.00354 38755
[View Peptides]   CHC1 Clathrin heavy chain, subunit of the major coat protein involved in intracellular protein transport ... 60 141 45.4% 0.00617 187233
[View Peptides]   SSC1 Hsp70 family ATPase, constituent of the import motor component of the Translocase of the Inner Mitoc... 23 146 45.4% 0.0161 70628
[View Peptides]   GAL1_YEAST (P04385) Galactokinase (EC 2.7.1.6) (Galactose kinase) 15 35 41.2% 0.0048 57813
[View Peptides]   KGD1 Component of the mitochondrial alpha-ketoglutarate dehydrogenase complex, which catalyzes a key step... 33 111 40.8% 0.00791 114416
[View Peptides]   HSP26_YEAST, HS2... (P15992) Heat shock protein 26 (26 kDa heat shock protein), (P15992) Heat shock protein 26 (26 kDa h... 6 29 40.8% 0.00984 23748
[View Peptides]   TSA1_YEAST (P34760) Peroxiredoxin TSA1 (EC 1.11.1.15) (Thioredoxin peroxidase) (Cytoplasmic thiol peroxidase 1)... 6 9 40.0% 0.00334 21459
[View Peptides]   FAS1 Beta subunit of fatty acid synthetase, which catalyzes the synthesis of long-chain saturated fatty a... 67 143 39.7% 0.00504 228689
[View Peptides]   HSP60 Tetradecameric mitochondrial chaperonin required for ATP-dependent folding of precursor polypeptides... 21 39 39.0% 0.00493 60752
[View Peptides]   LPD1 Dihydrolipoamide dehydrogenase, the lipoamide dehydrogenase component (E3) of the pyruvate dehydroge... 15 84 38.3% 0.0122 54010
[View Peptides]   FAS2 Alpha subunit of fatty acid synthetase, which catalyzes the synthesis of long-chain saturated fatty ... 52 111 38.1% 0.00425 206945
[View Peptides]   PFK1 Alpha subunit of heterooctameric phosphofructokinase involved in glycolysis, indispensable for anaer... 33 51 37.6% 0.00374 107970
[View Peptides]   ENO2_YEAST (P00925) Enolase 2 (EC 4.2.1.11) (2-phosphoglycerate dehydratase 2) (2-phospho-D-glycerate hydro-lya... 12 16 37.6% 0.00265 46783
[View Peptides]   gi|2914549, gi|1... gi|88192080|pdb|2AL1|B Chain B, Crystal Structure Analysis Of Enolase Mg Subunit Complex At Ph 8.0, ... 12 16 36.7% 0.00265 46671
[View Peptides]   SRL3 Cytoplasmic protein that, when overexpressed, suppresses the lethality of a rad53 null mutation; pot... 10 26 36.2% 0.0124 17014
[View Peptides]   MLC1 Essential light chain for Myo1p, light chain for Myo2p; stabilizes Myo2p by binding to the neck regi... 3 3 36.2% 0.00146 16444
[View Peptides]   G3P3_YEAST (P00359) Glyceraldehyde-3-phosphate dehydrogenase 3 (EC 1.2.1.12) (GAPDH 3) 6 11 36.0% 0.0024 35615
[View Peptides]   TPS1 Synthase subunit of trehalose-6-phosphate synthase/phosphatase complex, which synthesizes the storag... 12 17 35.2% 0.00248 56148
[View Peptides]   RVB2 Essential protein involved in transcription regulation; component of chromatin remodeling complexes;... 13 32 35.0% 0.00491 51612
[View Peptides]   KGD2 Dihydrolipoyl transsuccinylase, component of the mitochondrial alpha-ketoglutarate dehydrogenase com... 13 41 34.8% 0.0064 50431
[View Peptides]   RS8_YEAST (P05754) 40S ribosomal protein S8 (S14) (YS9) (RP19) 5 5 34.7% 0.00182 22358
[View Peptides]   HS74_YEAST, HSP7... (P22202) Heat shock protein SSA4, (P22202) Heat shock protein SSA4 32 128 34.6% 0.0144 69520
[View Peptides]   VPS1 Dynamin-like GTPase required for vacuolar sorting; also involved in actin cytoskeleton organization,... 20 43 33.4% 0.00442 78736
[View Peptides]   YML045W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 12 18 33.2% 0.00296 49122
[View Peptides]   YER159C-A, YDR31... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 12 18 33.2% 0.00296 49129
[View Peptides]   YDR098C-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 12 18 33.2% 0.00296 49057
[View Peptides]   YDR365W-A, YPL25... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 12 18 33.2% 0.00296 48953
[View Peptides]   YJR028W Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 12 18 33.2% 0.00296 49112
[View Peptides]   YGR027W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 12 18 33.2% 0.00296 49056
[View Peptides]   YLR227W-A, YML04... Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 12 18 33.2% 0.00296 48993
[View Peptides]   YDR261C-C Retrotransposon TYA Gag gene co-transcribed with TYB Pol; in YDRCTY1-3 TYB is mutant and probably no... 12 18 33.2% 0.00296 49009
[View Peptides]   RPP1B Ribosomal protein P1 beta, component of the ribosomal stalk, which is involved in interaction of tra... 2 25 33.0% 0.0171 10668
[View Peptides]   TEF1, TEF2 Translational elongation factor EF-1 alpha; also encoded by TEF2; functions in the binding reaction ... 11 76 32.8% 0.012 50033
[View Peptides]   CKS1 Cyclin-dependent protein kinase regulatory subunit and adaptor; modulates proteolysis of M-phase tar... 7 138 32.7% 0.0665 17795
[View Peptides]   VMA2 Subunit B of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase), a... 10 11 31.9% 0.00154 57749
[View Peptides]   SNU13 RNA binding protein, part of U3 snoRNP involved in rRNA processing, part of U4/U6-U5 tri-snRNP invol... 3 5 31.7% 0.00287 13569
[View Peptides]   CDC10 Component of the septin ring of the mother-bud neck that is required for cytokinesis; septins recrui... 5 9 31.4% 0.00202 37025
[View Peptides]   SEC13 Component of both the Nup84 nuclear pore sub-complex and the Sec13p-Sec31p complex of the COPII vesi... 5 7 31.3% 0.0017 33043
[View Peptides]   CCT7 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assembly of... 12 13 31.1% 0.00171 59736
[View Peptides]   CCT2 Subunit beta of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assemb... 10 13 30.9% 0.00178 57203
[View Peptides]   ZDS1 Protein that interacts with silencing proteins at the telomere, involved in transcriptional silencin... 37 121 30.8% 0.00956 103358
[View Peptides]   RL4A_YEAST (P10664) 60S ribosomal protein L4-A (L2A) (RP2) 8 13 30.7% 0.0026 38961
[View Peptides]   EF1B_YEAST (P32471) Elongation factor 1-beta (EF-1-beta) 3 11 30.7% 0.00388 22689
[View Peptides]   MPM1 Mitochondrial membrane protein of unknown function, contains no hydrophobic stretches 5 6 30.6% 0.00172 28470
[View Peptides]   SPT4 Protein involved in the regulating Pol I and Pol II transcription, pre-mRNA processing, kinetochore ... 2 3 30.4% 0.00213 11158
[View Peptides]   YBR012W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 10 15 30.0% 0.00246 49068
[View Peptides]   RVB1 Essential protein involved in transcription regulation; component of chromatin remodeling complexes;... 10 22 29.8% 0.00344 50453
[View Peptides]   gi|114575, gi|171110 gi|171110|gb|AAA34444.1| F1-ATPase beta-subunit precursor, sp|P00830|ATPB_YEAST ATP synthase beta ch... 9 13 29.7% 0.00184 54924
[View Peptides]   SEC21 Gamma subunit of coatomer, a heptameric protein complex that together with Arf1p forms the COPI coat... 19 27 29.6% 0.00209 104831
[View Peptides]   RET3 Zeta subunit of the coatomer complex (COPI), which coats Golgi-derived transport vesicles; involved ... 3 4 29.6% 0.00153 21688
[View Peptides]   CCT4 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assembly of... 9 9 29.5% 0.00123 57604
[View Peptides]   PFK2 Beta subunit of heterooctameric phosphofructokinase involved in glycolysis, indispensable for anaero... 18 32 29.2% 0.00241 104618
[View Peptides]   NDI1 NADH:ubiquinone oxidoreductase, transfers electrons from NADH to ubiquinone in the respiratory chain... 7 10 29.0% 0.00141 57250
[View Peptides]   RS2_YEAST (P25443) 40S ribosomal protein S2 (S4) (YS5) (RP12) (Omnipotent suppressor protein SUP44) 5 9 28.9% 0.00257 27319
[View Peptides]   gi|49258828 gi|49258828|pdb|1S1H|I Chain I, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obta... 3 4 28.9% 0.00204 15716
[View Peptides]   KAR2 ATPase involved in protein import into the ER, also acts as a chaperone to mediate protein folding i... 14 32 28.7% 0.00339 74468
[View Peptides]   G3P1_YEAST (P00360) Glyceraldehyde-3-phosphate dehydrogenase 1 (EC 1.2.1.12) (GAPDH 1) 7 10 28.7% 0.00218 35619
[View Peptides]   R141_YEAST, RS14... (P06367) 40S ribosomal protein S14-A (RP59A), (P06367) 40S ribosomal protein S14-A (RP59A) 3 14 28.7% 0.00744 14405
[View Peptides]   RS14B_YEAST, R14... (P39516) 40S ribosomal protein S14-B (RP59B), (P39516) 40S ribosomal protein S14-B (RP59B) 3 14 28.5% 0.00739 14519
[View Peptides]   SEC27 Essential beta'-coat protein of the COPI coatomer, involved in ER-to-Golgi and Golgi-to-ER transport... 18 24 28.0% 0.00195 99445
[View Peptides]   gi|49258842 gi|49258842|pdb|1S1I|D Chain D, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obta... 7 12 28.0% 0.0024 38931
[View Peptides]   TUB3 Alpha-tubulin; associates with beta-tubulin (Tub2p) to form tubulin dimer, which polymerizes to form... 6 7 27.9% 0.00114 49694
[View Peptides]   gi|6730174, gi|6... gi|6730177|pdb|1CK8|B Chain B, Rpl30-Mrna Complex From Yeast, gi|6730174|pdb|1CK5|B Chain B, Ribosom... 2 3 27.9% 0.00209 11284
[View Peptides]   CCT6 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, essential protein that is re... 7 8 27.8% 0.00106 59924
[View Peptides]   MNP1 Protein associated with the mitochondrial nucleoid; putative mitochondrial ribosomal protein with si... 3 3 27.8% 0.00112 20650
[View Peptides]   gi|22022642, gi|... gi|4371|emb|CAA30029.1| unnamed protein product [Saccharomyces cerevisiae], gi|22022642|emb|CAA31703... 8 21 27.6% 0.00487 33766
[View Peptides]   COG2 Essential component of the conserved oligomeric Golgi complex (Cog1p through Cog8p), a cytosolic tet... 4 4 27.6% 0.00105 31800
[View Peptides]   HCH1 Heat shock protein regulator that binds to Hsp90p and may stimulate ATPase activity; originally iden... 2 2 27.5% 9.45E-4 17246
[View Peptides]   COP1 Alpha subunit of COPI vesicle coatomer complex, which surrounds transport vesicles in the early secr... 23 38 27.4% 0.00229 135607
[View Peptides]   CDC3 Component of the septin ring of the mother-bud neck that is required for cytokinesis; septins recrui... 7 8 27.3% 0.00111 60039
[View Peptides]   gi|464861, gi|45... gi|464861|sp|P33298.1|PRS6B_YEAST RecName: Full=26S protease regulatory subunit 6B homolog; AltName:... 7 10 27.3% 0.00169 47970
[View Peptides]   gi|49258840 gi|49258840|pdb|1S1I|B Chain B, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obta... 5 20 27.3% 0.00572 27277
[View Peptides]   RS13_YEAST (P05756) 40S ribosomal protein S13 (S27A) (YS15) 3 3 27.3% 0.00145 16898
[View Peptides]   ACN9 Protein of the mitochondrial intermembrane space, required for acetate utilization and gluconeogenes... 2 2 27.1% 0.00109 15783
[View Peptides]   RPT2 One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation ... 7 7 26.8% 0.00116 48828
[View Peptides]   PIL1 Primary component of eisosomes, which are large immobile cell cortex structures associated with endo... 5 5 26.8% 0.00107 38349
[View Peptides]   PRE3 Beta 1 subunit of the 20S proteasome, responsible for cleavage after acidic residues in peptides 2 4 26.5% 0.00135 23548
[View Peptides]   RS3_YEAST (P05750) 40S ribosomal protein S3 (YS3) (RP13) 5 14 25.5% 0.00424 26372
[View Peptides]   EFT2, EFT1 Elongation factor 2 (EF-2), also encoded by EFT1; catalyzes ribosomal translocation during protein s... 12 13 25.4% 0.00112 93289
[View Peptides]   ILV5 Acetohydroxyacid reductoisomerase, mitochondrial protein involved in branched-chain amino acid biosy... 6 6 25.3% 0.0011 44368
[View Peptides]   MRPL7 Mitochondrial ribosomal protein of the large subunit 4 5 25.3% 0.00124 33099
[View Peptides]   RIP1 Ubiquinol-cytochrome-c reductase, a Rieske iron-sulfur protein of the mitochondrial cytochrome bc1 c... 3 3 24.7% 0.00101 23365
[View Peptides]   gi|133003, gi|17... gi|173235|gb|AAA35236.1| 5S ribosomal RNA binding-protein [Saccharomyces cerevisiae], gi|173232|gb|A... 6 8 24.6% 0.00195 33743
[View Peptides]   PUP3 Beta 3 subunit of the 20S proteasome involved in ubiquitin-dependent catabolism; human homolog is su... 3 7 24.4% 0.00247 22605
[View Peptides]   ATP1 Alpha subunit of the F1 sector of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily ... 7 15 24.2% 0.00199 58618
[View Peptides]   UME1 Negative regulator of meiosis, required for repression of a subset of meiotic genes during vegetativ... 7 8 24.1% 0.00126 51022
[View Peptides]   PET9 Major ADP/ATP carrier of the mitochondrial inner membrane, exchanges cytosolic ADP for mitochondrial... 5 7 23.9% 0.00159 34426
[View Peptides]   PRE6 Alpha 4 subunit of the 20S proteasome; may replace alpha 3 subunit (Pre9p) under stress conditions t... 4 5 23.2% 0.00142 28439
[View Peptides]   gi|130685, gi|4195 gi|4195|emb|CAA26184.1| unnamed protein product [Saccharomyces cerevisiae], sp|P04840|POR1_YEAST Out... 4 5 23.0% 0.00128 30429
[View Peptides]   VMA8 Subunit D of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase), a... 3 3 23.0% 8.47E-4 29194
[View Peptides]   CCT8 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assembly of... 7 8 22.9% 0.00102 61662
[View Peptides]   IDH2 Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase, which catalyzes the oxidation of... 4 4 22.8% 7.84E-4 39739
[View Peptides]   NIP1 eIF3c subunit of the eukaryotic translation initiation factor 3 (eIF3), involved in the assembly of ... 11 15 22.3% 0.00134 93204
[View Peptides]   CCT3 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assembly of... 5 5 22.3% 6.77E-4 58814
[View Peptides]   MET8 Bifunctional dehydrogenase and ferrochelatase, involved in the biosynthesis of siroheme, a prostheti... 5 12 22.3% 0.00317 31918
[View Peptides]   RS7A_YEAST (P26786) 40S ribosomal protein S7-A (RP30) 2 4 22.2% 0.00153 21491
[View Peptides]   G3P2_YEAST (P00358) Glyceraldehyde-3-phosphate dehydrogenase 2 (EC 1.2.1.12) (GAPDH 2) 5 10 22.1% 0.00218 35716
[View Peptides]   PAA1 Polyamine acetyltransferase; acetylates polyamines (e.g. putrescine, spermidine, spermine) and also ... 3 3 22.0% 0.00114 21947
[View Peptides]   COX6 Subunit VI of cytochrome c oxidase, which is the terminal member of the mitochondrial inner membrane... 2 2 21.6% 9.77E-4 17342
[View Peptides]   gi|15988133, gi|... gi|15988137|pdb|1ID3|F Chain F, Crystal Structure Of The Yeast Nucleosome Core Particle Reveals Fund... 2 2 21.6% 0.00142 11237
[View Peptides]   PDI1 Protein disulfide isomerase, multifunctional protein resident in the endoplasmic reticulum lumen, es... 6 6 21.5% 8.31E-4 58227
[View Peptides]   PSA1 GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase), synthesizes GDP-mannose from ... 4 4 21.3% 8.01E-4 39566
[View Peptides]   GAL10 UDP-glucose-4-epimerase, catalyzes the interconversion of UDP-galactose and UDP-D-glucose in galacto... 9 16 21.2% 0.00165 78195
[View Peptides]   PRE5 Alpha 6 subunit of the 20S proteasome 5 6 20.9% 0.00185 25604
[View Peptides]   RPT5 One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation ... 6 7 20.5% 0.00117 48256
[View Peptides]   ALF_YEAST (P14540) Fructose-bisphosphate aldolase (EC 4.1.2.13) 4 9 20.4% 0.00182 39490
[View Peptides]   ACC1 Acetyl-CoA carboxylase, biotin containing enzyme that catalyzes the carboxylation of acetyl-CoA to f... 28 35 20.1% 0.00113 250351
[View Peptides]   CDC19 Pyruvate kinase, functions as a homotetramer in glycolysis to convert phosphoenolpyruvate to pyruvat... 5 6 20.0% 8.68E-4 54545
[View Peptides]   RL8A_YEAST (P17076) 60S ribosomal protein L8-A (L7A-2) (L4-2) (YL5) (RP6) (Maintenance of killer protein 7) 3 3 20.0% 8.51E-4 27994
[View Peptides]   RL25_YEAST (P04456) 60S ribosomal protein L25 (YL25) (RP61L) 3 9 19.9% 0.00461 15626
[View Peptides]   ACT1 Actin, structural protein involved in cell polarization, endocytosis, and other cytoskeletal functio... 3 4 19.7% 7.71E-4 41690
[View Peptides]   RXT3 Subunit of the RPD3L complex; involved in histone deacetylation 2 2 19.4% 4.92E-4 33812
[View Peptides]   TUB2 Beta-tubulin; associates with alpha-tubulin (Tub1p and Tub3p) to form tubulin dimer, which polymeriz... 6 6 19.3% 9.49E-4 50923
[View Peptides]   IF52_YEAST, IF5A... (P23301) Eukaryotic translation initiation factor 5A-2 (eIF-5A-2) (eIF-4D) (Hypusine-containing prot... 2 3 19.2% 0.00139 16983
[View Peptides]   MRPL35 Mitochondrial ribosomal protein of the large subunit 3 3 19.1% 5.91E-4 42825
[View Peptides]   PDC1_YEAST, DCP1... (P06169) Pyruvate decarboxylase isozyme 1 (EC 4.1.1.1) (EC 4.1.1.-), (P06169) Pyruvate decarboxylase... 7 10 19.0% 0.00129 61364
[View Peptides]   SFH1 Component of the RSC chromatin remodeling complex; essential gene required for cell cycle progressio... 4 4 19.0% 6.79E-4 48777
[View Peptides]   RSM25 Mitochondrial ribosomal protein of the small subunit 2 2 18.9% 5.48E-4 30513
[View Peptides]   SEC26 Essential beta-coat protein of the COPI coatomer, involved in ER-to-Golgi protein trafficking and ma... 13 21 18.8% 0.00156 109019
[View Peptides]   BET3 Hydrophilic protein that acts in conjunction with SNARE proteins in targeting and fusion of ER to Go... 2 2 18.7% 7.49E-4 22129
[View Peptides]   SPT5 Protein involved in regulating Pol I and Pol II transcription and pre-mRNA processing; forms a compl... 13 22 18.3% 0.0015 115650
[View Peptides]   MPD2 Member of the protein disulfide isomerase (PDI) family, exhibits chaperone activity; overexpression ... 2 3 18.1% 7.83E-4 32401
[View Peptides]   CDC48 ATPase in ER, nuclear membrane and cytosol with homology to mammalian p97; in a complex with Npl4p a... 10 14 17.8% 0.00121 91996
[View Peptides]   ARP9 Component of both the SWI/SNF and RSC chromatin remodeling complexes; actin-related protein involved... 5 5 17.8% 7.74E-4 53074
[View Peptides]   PCK1 Phosphoenolpyruvate carboxykinase, key enzyme in gluconeogenesis, catalyzes early reaction in carboh... 5 5 17.7% 6.58E-4 60983
[View Peptides]   PRT1 eIF3b subunit of the core complex of translation initiation factor 3 (eIF3), essential for translati... 7 8 17.6% 7.58E-4 88130
[View Peptides]   CDC11 Component of the septin ring of the mother-bud neck that is required for cytokinesis; septins recrui... 5 6 17.6% 0.00105 47649
[View Peptides]   DPM1 Dolichol phosphate mannose (Dol-P-Man) synthase of the ER membrane, catalyzes the formation of Dol-P... 2 3 17.6% 8.12E-4 30362
[View Peptides]   CLC1 Clathrin light chain, subunit of the major coat protein involved in intracellular protein transport ... 2 2 17.6% 6.21E-4 26532
[View Peptides]   CYS4 Cystathionine beta-synthase, catalyzes synthesis of cystathionine from serine and homocysteine, the ... 5 5 17.4% 7.13E-4 56022
[View Peptides]   TCP1 Alpha subunit of chaperonin-containing T-complex, which mediates protein folding in the cytosol; inv... 6 9 17.2% 0.00116 60481
[View Peptides]   gi|49258841 gi|49258841|pdb|1S1I|C Chain C, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obta... 7 24 17.1% 0.0045 43626
[View Peptides]   LSM12 Protein of unknown function that may function in RNA processing; interacts with Pbp1p and Pbp4p and ... 2 3 17.1% 0.00116 21314
[View Peptides]   GAL7_YEAST (P08431) Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12) (Gal-1-P uridylyltransferase) (UDP-... 5 6 17.0% 0.00119 42254
[View Peptides]   GFA1_YEAST (P14742) Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) (Hexosephosp... 7 10 16.9% 0.00101 79916
[View Peptides]   NOP56 Essential evolutionarily-conserved nucleolar protein component of the box C/D snoRNP complexes that ... 5 5 16.9% 7.17E-4 56864
[View Peptides]   TUB1 Alpha-tubulin; associates with beta-tubulin (Tub2p) to form tubulin dimer, which polymerizes to form... 4 4 16.8% 6.47E-4 49800
[View Peptides]   RPB5 RNA polymerase subunit ABC27, common to RNA polymerases I, II, and III; contacts DNA and affects tra... 2 4 16.7% 0.00135 25079
[View Peptides]   FAR1 Cyclin-dependent kinase inhibitor that mediates cell cycle arrest in response to pheromone; also for... 8 11 16.6% 9.58E-4 94572
[View Peptides]   ASC1 G-protein beta subunit and guanine nucleotide dissociation inhibitor for Gpa2p; ortholog of RACK1 th... 3 3 16.6% 6.8E-4 34805
[View Peptides]   LDB7 Component of the RSC chromatin remodeling complex; interacts with Rsc3p, Rsc30p, Npl6p, and Htl1p to... 2 2 16.6% 9.97E-4 15869
[View Peptides]   VPS74 Protein required for Golgi localization of glycosyltransferases; binds the cytosolic domains of Golg... 3 4 16.5% 8.38E-4 39287
[View Peptides]   GDH1 NADP(+)-dependent glutamate dehydrogenase, synthesizes glutamate from ammonia and alpha-ketoglutarat... 4 4 16.3% 6.37E-4 49570
[View Peptides]   SCL1 Alpha 1 subunit of the 20S proteasome involved in the degradation of ubiquitinated substrates; 20S p... 3 4 16.3% 0.00115 28001
[View Peptides]   RPN1_YEAST (P38764) 26S proteasome regulatory subunit RPN1 (Proteasome non-ATPase subunit 1) 9 12 16.2% 8.75E-4 109361
[View Peptides]   SRB2 Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form ... 2 2 16.2% 6.89E-4 22894
[View Peptides]   DEF1 RNAPII degradation factor, forms a complex with Rad26p in chromatin, enables ubiquitination and prot... 6 10 16.1% 9.8E-4 83973
[View Peptides]   CAM1 Nuclear protein required for transcription of MXR1; binds the MXR1 promoter in the presence of other... 4 6 16.1% 0.00105 47088
[View Peptides]   TIF35 eIF3g subunit of the core complex of translation initiation factor 3 (eIF3), which is essential for ... 2 3 16.1% 7.92E-4 30501
[View Peptides]   CDC12 Component of the septin ring of the mother-bud neck that is required for cytokinesis; septins recrui... 5 6 16.0% 0.00107 46668
[View Peptides]   PMA1 Plasma membrane H+-ATPase, pumps protons out of the cell; major regulator of cytoplasmic pH and plas... 7 10 15.8% 7.88E-4 99619
[View Peptides]   LAT1 Dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complex, which catalyzes... 4 7 15.8% 0.00105 51818
[View Peptides]   SRV2 CAP (cyclase-associated protein) subunit of adenylyl cyclase complex; N-terminus binds adenylyl cycl... 6 7 15.6% 9.62E-4 57522
[View Peptides]   PEP4 Vacuolar aspartyl protease (proteinase A), required for the posttranslational precursor maturation o... 4 4 15.6% 7.14E-4 44499
[View Peptides]   IES3 Subunit of the INO80 chromatin remodeling complex 2 2 15.6% 5.78E-4 28243
[View Peptides]   VAC14 Protein involved in regulated synthesis of PtdIns(3,5)P(2), in control of trafficking of some protei... 10 11 15.5% 9.04E-4 99773
[View Peptides]   RPB3 RNA polymerase II third largest subunit B44, part of central core; similar to prokaryotic alpha subu... 3 3 15.4% 6.82E-4 35298
[View Peptides]   RS3B_YEAST (P23248) 40S ribosomal protein S1-B (RP10B) 3 5 15.4% 0.00142 28681
[View Peptides]   MYO2 One of two type V myosin motors (along with MYO4) involved in actin-based transport of cargos; requi... 14 15 15.3% 6.89E-4 180679
[View Peptides]   PRE1 Beta 4 subunit of the 20S proteasome; localizes to the nucleus throughout the cell cycle 2 4 15.2% 0.00146 22517
[View Peptides]   MKT1 Protein that forms a complex with Pbp1p that may mediate posttranscriptional regulation of HO endonu... 8 9 15.1% 7.84E-4 94494
[View Peptides]   RPN8_YEAST (Q08723) 26S proteasome regulatory subunit RPN8 3 3 15.1% 6.44E-4 38181
[View Peptides]   gi|840877, gi|13... gi|840877|emb|CAA31976.1| ribosomal protein A1 [Saccharomyces cerevisiae], gi|4373|emb|CAA30027.1| u... 2 2 15.1% 0.00136 10924
[View Peptides]   NAP1 Protein that interacts with mitotic cyclin Clb2p; required for the regulation of microtubule dynamic... 3 4 14.9% 6.94E-4 47885
[View Peptides]   GCD7 Beta subunit of the translation initiation factor eIF2B, the guanine-nucleotide exchange factor for ... 3 3 14.7% 5.69E-4 42570
[View Peptides]   YGP1 Cell wall-related secretory glycoprotein; induced by nutrient deprivation-associated growth arrest a... 3 4 14.7% 8.17E-4 37328
[View Peptides]   EF3A_YEAST (P16521) Elongation factor 3A (EF-3A) (EF-3) (Translation elongation factor 3A) (Eukaryotic elongati... 9 10 14.6% 6.93E-4 115862
[View Peptides]   YJL206C Putative protein of unknown function; similar to transcriptional regulators from the Zn[2]-Cys[6] bi... 8 10 14.5% 9.54E-4 86663
[View Peptides]   TEF4 Translation elongation factor EF-1 gamma 3 4 14.3% 7.02E-4 46520
[View Peptides]   MRPS35 Mitochondrial ribosomal protein of the small subunit 2 2 14.2% 4.19E-4 39575
[View Peptides]   AAC1 Mitochondrial inner membrane ADP/ATP translocator, exchanges cytosolic ADP for mitochondrially synth... 3 3 14.2% 7.02E-4 34121
[View Peptides]   SRP40 Nucleolar, serine-rich protein with a role in preribosome assembly or transport; may function as a c... 3 3 14.0% 5.34E-4 41015
[View Peptides]   YOL103W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 15 18 13.9% 7.42E-4 198613
[View Peptides]   RPN2_YEAST (P32565) 26S proteasome regulatory subunit RPN2 9 20 13.7% 0.00153 104101
[View Peptides]   MGS1 Protein with DNA-dependent ATPase and ssDNA annealing activities involved in maintenance of genome; ... 4 5 13.6% 6.16E-4 66544
[View Peptides]   SGN1 Cytoplasmic RNA-binding protein, contains an RNA recognition motif (RRM); may have a role in mRNA tr... 2 2 13.6% 5.78E-4 28954
[View Peptides]   GPG1 Proposed gamma subunit of the heterotrimeric G protein that interacts with the receptor Gpr1p; invol... 2 2 13.5% 0.00115 14922
[View Peptides]   PMA2 Plasma membrane H+-ATPase, isoform of Pma1p, involved in pumping protons out of the cell; regulator ... 6 9 13.4% 6.87E-4 102172
[View Peptides]   TUP1 General repressor of transcription, forms complex with Cyc8p, involved in the establishment of repre... 6 6 13.3% 6.08E-4 78308
[View Peptides]   RPT4 One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation ... 4 4 13.3% 6.62E-4 49408
[View Peptides]   RL8B_YEAST (P29453) 60S ribosomal protein L8-B (L7A-1) (L4-1) (YL5) (RP6) 2 2 13.3% 5.67E-4 27981
[View Peptides]   YER138C Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 16 22 13.2% 9.06E-4 198561
[View Peptides]   gi|6686356, gi|2... gi|6686356|sp|P47098.2|YJ11B_YEAST RecName: Full=Transposon Ty1-JR1 Gag-Pol polyprotein; AltName: Fu... 16 22 13.2% 9.06E-4 198615
[View Peptides]   ALD4 Mitochondrial aldehyde dehydrogenase, required for growth on ethanol and conversion of acetaldehyde ... 4 4 13.1% 5.57E-4 56724
[View Peptides]   NIS1 Protein localized in the bud neck at G2/M phase; physically interacts with septins; possibly involve... 2 2 13.0% 3.55E-4 45909
[View Peptides]   gi|729488 gi|729488|sp|P39676|FHP_YEAST Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric o... 3 4 13.0% 7.25E-4 44647
[View Peptides]   YHB1 Nitric oxide oxidoreductase, flavohemoglobin involved in nitric oxide detoxification; plays a role i... 3 4 13.0% 7.25E-4 44646
[View Peptides]   RSM7 Mitochondrial ribosomal protein of the small subunit, has similarity to E. coli S7 ribosomal protein 3 3 13.0% 8.78E-4 27816
[View Peptides]   PRE2 Beta 5 subunit of the 20S proteasome, responsible for the chymotryptic activity of the proteasome 2 2 12.9% 5.04E-4 31637
[View Peptides]   RPG1 eIF3a subunit of the core complex of translation initiation factor 3 (eIF3), essential for translati... 8 9 12.8% 6.75E-4 110344
[View Peptides]   NUP85 Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), required for assembly of the sub... 6 7 12.8% 6.8E-4 84898
[View Peptides]   RSC6 Component of the RSC chromatin remodeling complex; essential for mitotic growth; homolog of SWI/SNF ... 4 4 12.8% 5.99E-4 54165
[View Peptides]   ARP7 Component of both the SWI/SNF and RSC chromatin remodeling complexes; actin-related protein involved... 3 4 12.8% 6.06E-4 53810
[View Peptides]   R15B_YEAST, RL15... (P54780) 60S ribosomal protein L15-B (YL10) (L13) (RP15R) (YP18), (P54780) 60S ribosomal protein L15... 3 6 12.8% 0.00214 24291
[View Peptides]   gi|49258850 gi|49258850|pdb|1S1I|L Chain L, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obta... 3 6 12.8% 0.00214 24291
[View Peptides]   SIN4 Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form ... 6 7 12.7% 5.2E-4 111297
[View Peptides]   MET17_YEAST, MT1... (P06106) MET17 protein [Includes: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) (OAH sulfhydrylase)... 3 4 12.6% 6.53E-4 48541
[View Peptides]   SAR1 GTPase, GTP-binding protein of the ARF family, component of COPII coat of vesicles; required for tra... 2 2 12.6% 7.61E-4 21451
[View Peptides]   EDE1 Key endocytic protein involved in a network of interactions with other endocytic proteins, binds mem... 9 10 12.5% 5.24E-4 150783
[View Peptides]   SEC31 Component of the Sec13p-Sec31p complex of the COPII vesicle coat, required for vesicle formation in ... 9 10 12.5% 5.68E-4 138703
[View Peptides]   COR1 Core subunit of the ubiquinol-cytochrome c reductase complex (bc1 complex), which is a component of ... 3 3 12.5% 4.75E-4 50228
[View Peptides]   RS5_YEAST (P26783) 40S ribosomal protein S5 (S2) (YS8) (RP14) 3 7 12.5% 0.00226 24907
[View Peptides]   MRPL13 Mitochondrial ribosomal protein of the large subunit, not essential for mitochondrial translation 2 2 12.4% 5.26E-4 31526
[View Peptides]   PRE8 Alpha 2 subunit of the 20S proteasome 3 3 12.4% 8.68E-4 27162
[View Peptides]   YDR261C-D Retrotransposon TYA Gag and TYB Pol genes; in YDRCTY1-3 TYB is mutant and probably non-functional 15 21 12.3% 9.47E-4 181660
[View Peptides]   BCH1 Member of the ChAPs family (Chs5p-Arf1p-binding proteins: Bch1p, Bch2p, Bud7p, Chs6p), that forms th... 4 4 12.3% 3.99E-4 82049
[View Peptides]   NDE1 Mitochondrial external NADH dehydrogenase, a type II NAD(P)H:quinone oxidoreductase that catalyzes t... 3 3 12.3% 3.87E-4 62774
[View Peptides]   URA2 Bifunctional carbamoylphosphate synthetase (CPSase)-aspartate transcarbamylase (ATCase), catalyzes t... 21 25 12.2% 8.16E-4 245123
[View Peptides]   RPN13 Subunit of the 19S regulatory particle of the 26S proteasome lid; acts as a ubiquitin receptor for t... 2 6 12.2% 0.00278 17902
[View Peptides]   YPL014W Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th... 3 3 12.1% 5.69E-4 42477
[View Peptides]   gi|170996, gi|131634 gi|170996|gb|AAA34396.1| N-succinyl-5-aminoimidazole-4-carboxamide ribotide synthetase, gi|131634|sp... 2 2 12.1% 4.73E-4 34531
[View Peptides]   RPN12 Subunit of the 19S regulatory particle of the 26S proteasome lid; synthetically lethal with RPT1, wh... 2 4 12.0% 0.00106 31919
[View Peptides]   COQ4 Protein with a role in ubiquinone (Coenzyme Q) biosynthesis, possibly functioning in stabilization o... 2 3 11.9% 6.47E-4 38627
[View Peptides]   RS4_YEAST (P05753) 40S ribosomal protein S4 (S7) (YS6) (RP5) 4 4 11.9% 0.00111 29279
[View Peptides]   COPD_YEAST (P43621) Coatomer subunit delta (Delta-coat protein) (Delta-COP) 3 6 11.7% 7.96E-4 60497
[View Peptides]   BRE5 Ubiquitin protease cofactor, forms deubiquitination complex with Ubp3p that coregulates anterograde ... 3 3 11.7% 4.21E-4 57674
[View Peptides]   NOP58 Protein involved in pre-rRNA processing, 18S rRNA synthesis, and snoRNA synthesis; component of the ... 5 7 11.7% 9.9E-4 56956
[View Peptides]   ILV2 Acetolactate synthase, catalyses the first common step in isoleucine and valine biosynthesis and is ... 4 8 11.5% 8.42E-4 74937
[View Peptides]   gi|416765, gi|287911 gi|416765|sp|P25655.2|NOT1_YEAST RecName: Full=General negative regulator of transcription subunit 1... 14 16 11.4% 5.49E-4 240332
[View Peptides]   gi|1326042, gi|4... gi|4558245|pdb|5PGM|H Chain H, Saccharomyces Cerevisiae Phosphoglycerate Mutase, gi|4558244|pdb|5PGM... 2 2 11.4% 5.88E-4 27477
[View Peptides]   PRE4 Beta 7 subunit of the 20S proteasome 2 2 11.3% 5.44E-4 29443
[View Peptides]   gi|2131099, gi|6... gi|6686357|sp|P47100|YJZ9_YEAST Transposon Ty1 protein B, gi|2131099|emb|CAA89556.1| TY1B [Saccharom... 15 21 11.2% 8.65E-4 198592
[View Peptides]   YGR027W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 15 21 11.2% 8.65E-4 198656
[View Peptides]   GUT2 Mitochondrial glycerol-3-phosphate dehydrogenase; expression is repressed by both glucose and cAMP a... 5 5 11.2% 5.57E-4 72389
[View Peptides]   YER160C Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 15 21 11.2% 8.65E-4 198568
[View Peptides]   gi|2120067, gi|7... gi|74627262|sp|Q12088.1|YL11B_YEAST RecName: Full=Transposon Ty1-LR1 Gag-Pol polyprotein; AltName: F... 15 21 11.2% 8.65E-4 198460
[View Peptides]   MRPL15 Mitochondrial ribosomal protein of the large subunit 2 2 11.1% 5.72E-4 28167
[View Peptides]   YHR214C-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 15 22 11.0% 8.87E-4 202816
[View Peptides]   YDJ1 Protein chaperone involved in regulation of the HSP90 and HSP70 functions; involved in protein trans... 4 13 11.0% 0.0023 44671
[View Peptides]   gi|1732237, gi|2... sp|P89105|CTR9_YEAST CTR9 protein, gi|1732237|gb|AAB38704.1| CTR9 [Saccharomyces cerevisiae] 7 10 10.9% 6.71E-4 124751
[View Peptides]   PRS1 5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase, synthesizes PRPP, which is required for nucleot... 3 3 10.8% 5.08E-4 47048
[View Peptides]   ACE2 Transcription factor that activates expression of early G1-specific genes, localizes to daughter cel... 4 4 10.5% 3.76E-4 86634
[View Peptides]   YBR012W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 13 18 10.4% 7.41E-4 198868
[View Peptides]   CBF5 Pseudouridine synthase catalytic subunit of box H/ACA small nucleolar ribonucleoprotein particles (s... 3 3 10.4% 4.49E-4 54705
[View Peptides]   DHA6_YEAST, ALDH... (P54115) Magnesium-activated aldehyde dehydrogenase, cytosolic (EC 1.2.1.3) (Mg(2+)-activated acetal... 3 3 10.4% 4.35E-4 54283
[View Peptides]   RPN6 Essential, non-ATPase regulatory subunit of the 26S proteasome lid required for the assembly and act... 2 2 10.4% 3.33E-4 49774
[View Peptides]   LSP1 Primary component of eisosomes, which are large immobile patch structures at the cell cortex associa... 2 2 10.3% 4.24E-4 38071
[View Peptides]   TPS2 Phosphatase subunit of the trehalose-6-phosphate synthase/phosphatase complex, which synthesizes the... 5 6 10.2% 4.84E-4 102976
[View Peptides]   RS3A_YEAST (P33442) 40S ribosomal protein S1-A (RP10A) 2 4 10.2% 0.00114 28612
[View Peptides]   SLK19 Kinetochore-associated protein required for normal segregation of chromosomes in meiosis and mitosis... 4 4 10.1% 3.52E-4 95380
[View Peptides]   YGR250C Putative RNA binding protein; localizes to stress granules induced by glucose deprivation; interacts... 5 6 10.1% 5.55E-4 89513
[View Peptides]   RSC8 Component of the RSC chromatin remodeling complex; essential for viability and mitotic growth; homol... 4 6 10.1% 7.79E-4 63168
[View Peptides]   gi|416572, gi|170980 sp|P32316|ACH1_YEAST Acetyl-CoA hydrolase (Acetyl-CoA deacylase) (Acetyl-CoA acylase), gi|170980|gb|... 2 2 10.1% 2.75E-4 58768
[View Peptides]   ADH2_YEAST (P00331) Alcohol dehydrogenase 2 (EC 1.1.1.1) (Alcohol dehydrogenase II) (YADH-2) 2 2 10.1% 4.17E-4 36601
[View Peptides]   MGE1 Mitochondrial matrix cochaperone, acts as a nucleotide release factor for Ssc1p in protein transloca... 4 6 10.1% 0.0019 26066
[View Peptides]   gi|1945315, gi|1... gi|1945316|emb|CAA97035.1| TY1B [Saccharomyces cerevisiae], gi|1945315|emb|CAA97027.1| TY1B [Sacchar... 13 16 10.0% 6.59E-4 198621
[View Peptides]   FIN1 Spindle pole body-related intermediate filament protein; forms cell cycle-specific filaments between... 3 6 10.0% 0.00149 33186
[View Peptides]   RPT1 One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation ... 3 6 9.9% 9.29E-4 51983
[View Peptides]   SEC7 Guanine nucleotide exchange factor (GEF) for ADP ribosylation factors involved in proliferation of t... 12 14 9.8% 5.04E-4 226884
[View Peptides]   TCB1 Lipid-binding protein containing three calcium and lipid binding domains; non-tagged protein localiz... 7 7 9.7% 4.27E-4 133576
[View Peptides]   PRS5 5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase, synthesizes PRPP, which is required for nucleot... 2 3 9.7% 4.37E-4 53505
[View Peptides]   YGR130C Putative protein of unknown function; GFP-fusion protein localizes to the cytoplasm; possible compon... 3 3 9.6% 2.66E-4 92698
[View Peptides]   IMD3 Inosine monophosphate dehydrogenase, catalyzes the first step of GMP biosynthesis, member of a four-... 3 3 9.6% 4.15E-4 56585
[View Peptides]   PTC7 Type 2C protein phosphatase; YHR076W is alternatively spliced to create two mRNA isoforms; protein f... 2 3 9.6% 5.8E-4 41191
[View Peptides]   PIM1 ATP-dependent Lon protease, involved in degradation of misfolded proteins in mitochondria; required ... 5 5 9.4% 3.19E-4 127112
[View Peptides]   CHS5 Component of the exomer complex, which also contains Csh6p, Bch1p, Bch2p, and Bud7p and is involved ... 2 2 9.4% 2.15E-4 73639
[View Peptides]   GNT1 N-acetylglucosaminyltransferase capable of modification of N-linked glycans in the Golgi apparatus 2 2 9.4% 2.94E-4 57578
[View Peptides]   OM45 Protein of unknown function, major constituent of the mitochondrial outer membrane; located on the o... 2 2 9.4% 3.68E-4 44580
[View Peptides]   IMD1 [DUBIOUS] Nonfunctional protein with homology to IMP dehydrogenase; probable pseudogene, located clo... 2 2 9.4% 3.59E-4 44386
[View Peptides]   ARO1 Pentafunctional arom protein, catalyzes steps 2 through 6 in the biosynthesis of chorismate, which i... 9 9 9.3% 4.1E-4 174754
[View Peptides]   MLF3 Serine-rich protein of unknown function, predicted to be palmitoylated; overproduction suppresses th... 2 3 9.3% 4.8E-4 49210
[View Peptides]   MRP51 Mitochondrial ribosomal protein of the small subunit; MRP51 exhibits genetic interactions with mutat... 2 2 9.3% 4.2E-4 39445
[View Peptides]   GCN1 Positive regulator of the Gcn2p kinase activity, forms a complex with Gcn20p; proposed to stimulate ... 18 20 9.2% 5.41E-4 296697
[View Peptides]   SRB4 Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form ... 3 4 9.2% 4.21E-4 78476
[View Peptides]   MRPL3 Mitochondrial ribosomal protein of the large subunit 2 2 9.2% 3.71E-4 44000
[View Peptides]   SEH1 Nuclear pore protein that is part of the evolutionarily conserved Nup84p complex (Nup84p, Nup85p, Nu... 2 3 9.2% 6.21E-4 39123
[View Peptides]   FIP1 Subunit of cleavage polyadenylation factor (CPF), interacts directly with poly(A) polymerase (Pap1p)... 2 3 9.2% 6.63E-4 35777
[View Peptides]   PUF3 Protein of the mitochondrial outer surface, links the Arp2/3 complex with the mitochore during anter... 4 4 9.1% 3.29E-4 98068
[View Peptides]   SED5 cis-Golgi t-SNARE syntaxin required for vesicular transport between the ER and the Golgi complex, bi... 2 2 9.1% 4.25E-4 38807
[View Peptides]   gi|1945331, gi|1... gi|1945334|emb|CAA97182.1| TY1B [Saccharomyces cerevisiae], gi|1945331|emb|CAA97178.1| TY1B [Sacchar... 12 15 9.0% 6.18E-4 198659
[View Peptides]   RPD3 Histone deacetylase; regulates transcription and silencing; plays a role in regulating Ty1 transposi... 3 4 9.0% 6.68E-4 48904
[View Peptides]   DED1 ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase, required for translation initiation of all ye... 4 4 8.9% 4.79E-4 65553
[View Peptides]   PRE9 Alpha 3 subunit of the 20S proteasome, the only nonessential 20S subunit; may be replaced by the alp... 2 2 8.9% 5.6E-4 28714
[View Peptides]   RSM10 Mitochondrial ribosomal protein of the small subunit, has similarity to E. coli S10 ribosomal protei... 2 3 8.9% 0.00107 23424
[View Peptides]   GDH2 NAD(+)-dependent glutamate dehydrogenase, degrades glutamate to ammonia and alpha-ketoglutarate; exp... 6 7 8.7% 4.63E-4 124332
[View Peptides]   RPA135 RNA polymerase I second largest subunit A135 6 6 8.4% 3.61E-4 135742
[View Peptides]   TBF1 Telobox-containing general regulatory factor; binds to TTAGGG repeats within subtelomeric anti-silen... 2 2 8.4% 2.57E-4 62824
[View Peptides]   PGK_YEAST (P00560) Phosphoglycerate kinase (EC 2.7.2.3) 4 8 8.2% 0.00139 44607
[View Peptides]   MSC7 Protein of unknown function, green fluorescent protein (GFP)-fusion protein localizes to the endopla... 3 3 8.1% 3.37E-4 71321
[View Peptides]   CIT1 Citrate synthase, catalyzes the condensation of acetyl coenzyme A and oxaloacetate to form citrate; ... 3 3 8.1% 4.53E-4 53360
[View Peptides]   TYS1 Cytoplasmic tyrosyl-tRNA synthetase, required for cytoplasmic protein synthesis; interacts with posi... 2 3 8.1% 5.5E-4 44020
[View Peptides]   17PM_#8|body(1:1... (P00330) Alcohol dehydrogenase 1 (EC 1.1.1.1) (Alcohol dehydrogenase I) (YADH-1), Alcohol dehydrogen... 2 2 8.1% 4.17E-4 36692
[View Peptides]   EXO70 Subunit of the exocyst complex (Sec3p, Sec5p, Sec6p, Sec8p, Sec10p, Sec15p, Exo70p, and Exo84p), whi... 2 3 8.0% 3.48E-4 71294
[View Peptides]   LEO1 Component of the Paf1 complex, which associates with RNA polymerase II and is involved in histone me... 2 2 8.0% 3.12E-4 53920
[View Peptides]   gi|731756, gi|45... gi|731756|sp|P38873|YHY6_YEAST WD repeat protein YHR186C, pir||S46686 hypothetical protein YHR186c -... 6 7 7.9% 3.28E-4 175829
[View Peptides]   TAF5 Subunit (90 kDa) of TFIID and SAGA complexes, involved in RNA polymerase II transcription initiation... 3 3 7.9% 2.72E-4 88968
[View Peptides]   FAA4 Long chain fatty acyl-CoA synthetase, activates imported fatty acids with a preference for C12:0-C16... 3 3 7.9% 3.13E-4 77267
[View Peptides]   MFT1 Subunit of the THO complex, which is a nuclear complex comprised of Hpr1p, Mft1p, Rlr1p, and Thp2p, ... 2 2 7.9% 3.69E-4 44996
[View Peptides]   DOP1 Golgi-localized, leucine-zipper domain containing protein; involved in endosome to Golgi transport, ... 8 10 7.8% 4.26E-4 194686
[View Peptides]   gi|261567, gi|399207 gi|399207|sp|P31384.1|CCR4_YEAST RecName: Full=Glucose-repressible alcohol dehydrogenase transcripti... 4 4 7.8% 3.46E-4 94700
[View Peptides]   PDC5_YEAST, DCP2... (P16467) Pyruvate decarboxylase isozyme 2 (EC 4.1.1.1) (EC 4.1.1.-), (P16467) Pyruvate decarboxylase... 3 4 7.8% 5.15E-4 61781
[View Peptides]   IMD2 Inosine monophosphate dehydrogenase, catalyzes the rate-limiting step in GTP biosynthesis, expressio... 2 2 7.8% 2.76E-4 56530
[View Peptides]   RSM24 Mitochondrial ribosomal protein of the small subunit 2 3 7.8% 6.8E-4 37393
[View Peptides]   NSP1 Essential component of the nuclear pore complex, which mediates nuclear import and export, found in ... 4 5 7.7% 4.39E-4 86516
[View Peptides]   TCB3 Lipid-binding protein, localized to the bud via specific mRNA transport; non-tagged protein detected... 7 7 7.6% 3.28E-4 171075
[View Peptides]   SEC23 GTPase-activating protein, stimulates the GTPase activity of Sar1p; component of the Sec23p-Sec24p h... 3 3 7.6% 2.82E-4 85385
[View Peptides]   LYS4 Homoaconitase, catalyzes the conversion of homocitrate to homoisocitrate, which is a step in the lys... 2 2 7.6% 2.09E-4 75151
[View Peptides]   EDC3 Non-essential conserved protein of unknown function, plays a role in mRNA decapping by specifically ... 2 2 7.6% 2.62E-4 61340
[View Peptides]   PEX30 Peroxisomal integral membrane protein, involved in negative regulation of peroxisome number; partial... 2 2 7.6% 2.76E-4 59462
[View Peptides]   TAF6 Subunit (60 kDa) of TFIID and SAGA complexes, involved in transcription initiation of RNA polymerase... 2 2 7.6% 2.8E-4 57902
[View Peptides]   PDA1 E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, catalyzes the direct oxidative decarbo... 2 2 7.6% 3.44E-4 46343
[View Peptides]   PFK27 6-phosphofructo-2-kinase, catalyzes synthesis of fructose-2,6-bisphosphate; inhibited by phosphoenol... 2 2 7.6% 3.64E-4 45318
[View Peptides]   HMLALPHA2, MATALPHA2 Silenced copy of ALPHA2 at HML; homeobox-domain protein that associates with Mcm1p in haploid cells ... 2 3 7.6% 0.00103 24282
[View Peptides]   RPC40 RNA polymerase subunit AC40, common to RNA polymerase I and III 2 2 7.5% 4.32E-4 37687
[View Peptides]   STH1 ATPase component of the RSC chromatin remodeling complex; required for expression of early meiotic g... 7 8 7.4% 4.26E-4 156742
[View Peptides]   RPN9 Non-ATPase regulatory subunit of the 26S proteasome, has similarity to putative proteasomal subunits... 2 3 7.4% 5.52E-4 45783
[View Peptides]   RCL1 Subunit of U3-containing 90S preribosome processome complex involved in 18S rRNA biogenesis and smal... 2 2 7.4% 3.94E-4 40171
[View Peptides]   KC22_YEAST, CSK2... (P19454) Casein kinase II, alpha' chain (CK II) (EC 2.7.1.37), (P19454) Casein kinase II subunit alp... 2 3 7.4% 6.42E-4 39272
[View Peptides]   YOR152C Putative protein of unknown function; has no similarity to any known protein; YOR152C is not an esse... 2 2 7.4% 5.65E-4 29693
[View Peptides]   TEX1 Protein involved in mRNA export, component of the transcription export (TREX) complex 2 2 7.3% 3.43E-4 47167
[View Peptides]   RGR1 Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form ... 4 4 7.2% 2.67E-4 123358
[View Peptides]   NUP82 Nucleoporin, subunit of the nuclear pore complex (NPC); forms a subcomplex with Gle2p, Nup159p, Nsp1... 3 3 7.2% 3.04E-4 82085
[View Peptides]   SRP68 Core component of the signal recognition particle (SRP) ribonucleoprotein (RNP) complex that functio... 2 3 7.2% 3.62E-4 69006
[View Peptides]   SNF12 73 kDa subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation; h... 2 2 7.1% 2.55E-4 63871
[View Peptides]   YCG1 Subunit of the condensin complex; required for establishment and maintenance of chromosome condensat... 4 4 7.0% 2.79E-4 117851
[View Peptides]   YHL039W Putative protein of unknown function; contains a SET-domain; predicted to be involved in ribosome bi... 2 2 7.0% 2.47E-4 67453
[View Peptides]   BOP2 Protein of unknown function 2 2 7.0% 2.54E-4 66344
[View Peptides]   ARP4 Nuclear actin-related protein involved in chromatin remodeling, component of chromatin-remodeling en... 2 2 7.0% 2.96E-4 54832
[View Peptides]   GYS1_YEAST (P23337) Glycogen [starch] synthase isoform 1 (EC 2.4.1.11) 2 2 6.9% 2.05E-4 80379
[View Peptides]   ENT2 Epsin-like protein required for endocytosis and actin patch assembly and functionally redundant with... 2 3 6.9% 3.54E-4 71807
[View Peptides]   YJL045W Minor succinate dehydrogenase isozyme; homologous to Sdh1p, the major isozyme reponsible for the oxi... 2 3 6.9% 3.42E-4 69383
[View Peptides]   RPC34 RNA polymerase III subunit C34; interacts with TFIIIB70 and is a key determinant in pol III recruitm... 2 2 6.9% 4.56E-4 36135
[View Peptides]   STE5 Pheromone-response scaffold protein; binds Ste11p, Ste7p, and Fus3p kinases, forming a MAPK cascade ... 3 3 6.8% 2.37E-4 102727
[View Peptides]   YHR020W Protein of unknown function that may interact with ribosomes, based on co-purification experiments; ... 3 3 6.8% 3.15E-4 77386
[View Peptides]   MRH4 Mitochondrial ATP-dependent RNA helicase of the DEAD-box family, plays an essential role in mitochon... 2 2 6.8% 2.58E-4 63058
[View Peptides]   RSC2 Component of the RSC chromatin remodeling complex; required for expression of mid-late sporulation-s... 3 3 6.7% 2.44E-4 102300
[View Peptides]   ACO1 Aconitase, required for the tricarboxylic acid (TCA) cycle and also independently required for mitoc... 3 4 6.7% 3.72E-4 85368
[View Peptides]   MAL31 Maltose permease, high-affinity maltose transporter (alpha-glucoside transporter); encoded in the MA... 2 2 6.7% 2.35E-4 68263
[View Peptides]   SWC4 Component of the Swr1p complex that incorporates Htz1p into chromatin; component of the NuA4 histone... 2 2 6.7% 3.04E-4 55213
[View Peptides]   YIL108W Putative metalloprotease 3 5 6.6% 5.19E-4 77414
[View Peptides]   SUP35 Translation termination factor eRF3; altered protein conformation creates the [PSI(+)] prion, a domi... 2 2 6.6% 2.11E-4 76551
[View Peptides]   LAP4 Vacuolar aminopeptidase yscI; zinc metalloproteinase that belongs to the peptidase family M18; often... 2 2 6.6% 2.81E-4 57093
[View Peptides]   UGP1 UDP-glucose pyrophosphorylase (UGPase), catalyses the reversible formation of UDP-Glc from glucose 1... 2 2 6.6% 2.9E-4 55988
[View Peptides]   SIN3 Component of the Sin3p-Rpd3p histone deacetylase complex, involved in transcriptional repression and... 5 6 6.5% 2.82E-4 174838
[View Peptides]   KAP95 Karyopherin beta, forms a complex with Srp1p/Kap60p; interacts with nucleoporins to mediate nuclear ... 3 8 6.5% 6.72E-4 94776
[View Peptides]   MSC3 Protein of unknown function, green fluorescent protein (GFP)-fusion protein localizes to the cell pe... 2 2 6.5% 1.99E-4 80530
[View Peptides]   GCD2 Delta subunit of the translation initiation factor eIF2B, the guanine-nucleotide exchange factor for... 3 3 6.5% 3.33E-4 70852
[View Peptides]   MEX67 Poly(A)RNA binding protein involved in nuclear mRNA export, component of the nuclear pore; ortholog ... 3 6 6.5% 7.24E-4 67352
[View Peptides]   gi|2331297, gi|3... gi|3122096|sp|O13329.1|FOB1_YEAST RecName: Full=DNA replication fork-blocking protein FOB1, gi|23312... 2 2 6.5% 2.55E-4 65289
[View Peptides]   MDJ1 Co-chaperone that stimulates the ATPase activity of the HSP70 protein Ssc1p; involved in protein fol... 2 5 6.5% 7.07E-4 55561
[View Peptides]   NUP2 Nucleoporin involved in nucleocytoplasmic transport, binds to either the nucleoplasmic or cytoplasmi... 3 3 6.4% 3.01E-4 77881
[View Peptides]   MED1 Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form ... 2 2 6.4% 2.55E-4 64251
[View Peptides]   YDR210C-C Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 2 3 6.4% 4.93E-4 49187
[View Peptides]   YHR033W Putative protein of unknown function; epitope-tagged protein localizes to the cytoplasm 2 2 6.4% 3.42E-4 46864
[View Peptides]   TSL1 Large subunit of trehalose 6-phosphate synthase (Tps1p)/phosphatase (Tps2p) complex, which converts ... 4 5 6.3% 3.29E-4 123018
[View Peptides]   MYO4 One of two type V myosin motors (along with MYO2) involved in actin-based transport of cargos; requi... 6 7 6.2% 3.44E-4 169343
[View Peptides]   MET5 Sulfite reductase beta subunit, involved in amino acid biosynthesis, transcription repressed by meth... 4 4 6.2% 2.01E-4 161218
[View Peptides]   PHO85 Cyclin-dependent kinase, with ten cyclin partners; involved in regulating the cellular response to n... 3 4 6.2% 9.48E-4 34906
[View Peptides]   FAA1 Long chain fatty acyl-CoA synthetase, activates imported fatty acids with a preference for C12:0-C16... 3 3 6.1% 3.1E-4 77866
[View Peptides]   CDC23 Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C), which is a ubiquitin-protein ligase req... 2 2 6.1% 2.31E-4 73114
[View Peptides]   SGF73 Subunit of SAGA histone acetyltransferase complex; involved in formation of the preinitiation comple... 2 2 6.1% 2.2E-4 72878
[View Peptides]   UTP18 Possible U3 snoRNP protein involved in maturation of pre-18S rRNA, based on computational analysis o... 2 2 6.1% 2.43E-4 66424
[View Peptides]   GND1 6-phosphogluconate dehydrogenase (decarboxylating), catalyzes an NADPH regenerating reaction in the ... 2 2 6.1% 2.96E-4 53543
[View Peptides]   MCH2 Protein with similarity to mammalian monocarboxylate permeases, which are involved in transport of m... 2 2 6.1% 3.06E-4 52342
[View Peptides]   IFH1 Coactivator that regulates transcription of ribosomal protein (RP) genes; recruited to RP gene promo... 3 3 6.0% 2.0E-4 122491
[View Peptides]   COG3 Essential component of the conserved oligomeric Golgi complex (Cog1p through Cog8p), a cytosolic tet... 3 3 6.0% 2.71E-4 92544
[View Peptides]   HEH2 Inner nuclear membrane (INM) protein; contains helix-extension-helix (HEH) motif, nuclear localizati... 2 2 6.0% 2.18E-4 76377
[View Peptides]   MSN4 Transcriptional activator related to Msn2p; activated in stress conditions, which results in translo... 2 2 6.0% 2.3E-4 69723
[View Peptides]   RSC9 Component of the RSC chromatin remodeling complex; DNA-binding protein involved in the synthesis of ... 2 2 6.0% 2.49E-4 65218
[View Peptides]   DCP3_YEAST, PDC6... (P26263) Pyruvate decarboxylase isozyme 3 (EC 4.1.1.1) (EC 4.1.1.-), (P26263) Pyruvate decarboxylase... 2 4 6.0% 5.15E-4 61449
[View Peptides]   YPL257W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 5 6 5.9% 2.47E-4 198575
[View Peptides]   NOT5 Subunit of the CCR4-NOT complex, which is a global transcriptional regulator with roles in transcrip... 3 3 5.9% 3.87E-4 65855
[View Peptides]   TCM62 Protein involved in the assembly of the mitochondrial succinate dehydrogenase complex; putative chap... 2 2 5.9% 2.53E-4 64252
[View Peptides]   YTA7 Protein that localizes to chromatin and has a role in regulation of histone gene expression; has a b... 5 5 5.8% 2.62E-4 157406
[View Peptides]   CRN1 Coronin, cortical actin cytoskeletal component that associates with the Arp2p/Arp3p complex to regul... 2 2 5.8% 2.22E-4 72553
[View Peptides]   NSR1 Nucleolar protein that binds nuclear localization sequences, required for pre-rRNA processing and ri... 2 2 5.8% 3.49E-4 44535
[View Peptides]   MDN1 Huge dynein-related AAA-type ATPase (midasin), forms extended pre-60S particle with the Rix1 complex... 13 13 5.7% 1.91E-4 559316
[View Peptides]   AMS1 Vacuolar alpha mannosidase, involved in free oligosaccharide (fOS) degradation; delivered to the vac... 3 4 5.7% 2.67E-4 124499
[View Peptides]   QNS1 Glutamine-dependent NAD(+) synthetase, essential for the formation of NAD(+) from nicotinic acid ade... 3 3 5.7% 3.04E-4 80686
[View Peptides]   RAD30 DNA polymerase eta, involved in tranlesion synthesis during post-replication repair; catalyzes the s... 2 2 5.7% 2.29E-4 71515
[View Peptides]   GAL2 Galactose permease, required for utilization of galactose; also able to transport glucose 2 3 5.7% 3.78E-4 63626
[View Peptides]   YPL245W Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to bo... 2 2 5.7% 3.18E-4 52257
[View Peptides]   CFT2 Subunit of the mRNA cleavage and polyadenlylation factor (CPF); required for pre-mRNA cleavage, poly... 3 3 5.6% 2.52E-4 96254
[View Peptides]   YMR031C Protein of unknown function with similarity to Ykl050cp and Uso1p; the authentic, non-tagged protein... 3 3 5.6% 2.57E-4 93345
[View Peptides]   SLP1 Integral membrane protein of unknown function; member of the SUN-like family of proteins; genetic in... 3 4 5.6% 4.93E-4 67452
[View Peptides]   RPN5 Essential, non-ATPase regulatory subunit of the 26S proteasome lid, similar to mammalian p55 subunit... 2 2 5.6% 3.25E-4 51769
[View Peptides]   DBP7 Putative ATP-dependent RNA helicase of the DEAD-box family involved in ribosomal biogenesis; essenti... 2 2 5.5% 1.95E-4 83308
[View Peptides]   MLH2 Protein involved in the mismatch repair of certain frameshift intermediates and involved in meiotic ... 2 2 5.5% 2.08E-4 78248
[View Peptides]   SWI6 Transcription cofactor, forms complexes with DNA-binding proteins Swi4p and Mbp1p to regulate transc... 3 3 5.4% 2.7E-4 90560
[View Peptides]   MON2 Peripheral membrane protein with a role in endocytosis and vacuole integrity, interacts with Arl1p a... 6 6 5.3% 2.65E-4 186835
[View Peptides]   RPA190 RNA polymerase I largest subunit A190 4 5 5.3% 2.17E-4 186431
[View Peptides]   NUP133 Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), localizes to both sides of the N... 5 5 5.3% 3.12E-4 133320
[View Peptides]   KEL1 Protein required for proper cell fusion and cell morphology; functions in a complex with Kel2p to ne... 4 4 5.2% 2.48E-4 131094
[View Peptides]   gi|730074, gi|432492 sp|P39692|MT10_YEAST Sulfite reductase [NADPH] flavoprotein component, gi|432492|gb|AAA61982.1| ass... 4 4 5.2% 2.79E-4 114782
[View Peptides]   PKH3 Protein kinase with similarity to mammalian phosphoinositide-dependent kinase 1 (PDK1) and yeast Pkh... 2 2 5.2% 1.61E-4 100476
[View Peptides]   UBP10 Ubiquitin-specific protease that deubiquitinates ubiquitin-protein moieties; may regulate silencing ... 2 5 5.2% 4.56E-4 88517
[View Peptides]   GCN20 Positive regulator of the Gcn2p kinase activity, forms a complex with Gcn1p; proposed to stimulate G... 2 2 5.2% 1.92E-4 85027
[View Peptides]   TPO5 Protein involved in excretion of putrescine and spermidine; putative polyamine transporter in the Go... 2 2 5.2% 2.34E-4 69243
[View Peptides]   NUP84 Subunit of the nuclear pore complex (NPC), forms a subcomplex with Nup85p, Nup120p, Nup145p-C, Sec13... 2 2 5.1% 1.99E-4 83635
[View Peptides]   GYS2_YEAST (P27472) Glycogen [starch] synthase isoform 2 (EC 2.4.1.11) 2 2 5.1% 2.05E-4 79948
[View Peptides]   YDR170W-A Retrotransposon TYA Gag gene; Gag is a nucleocapsid protein that is the structural constituent of vi... 2 5 5.0% 8.22E-4 49445
[View Peptides]   YMR046C Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 2 5 5.0% 8.22E-4 49274
[View Peptides]   SMC3 Subunit of the multiprotein cohesin complex required for sister chromatid cohesion in mitotic cells;... 3 3 4.9% 1.76E-4 141336
[View Peptides]   NUT1 Component of the RNA polymerase II mediator complex, which is required for transcriptional activatio... 4 5 4.9% 3.19E-4 128794
[View Peptides]   YMR086W Protein of unknown function that may interact with ribosomes, based on co-purification experiments; ... 2 2 4.9% 1.51E-4 105874
[View Peptides]   POP1 Subunit of both RNase MRP, which cleaves pre-rRNA, and nuclear RNase P, which cleaves tRNA precursor... 2 2 4.9% 1.65E-4 100395
[View Peptides]   VPS33 ATP-binding protein that is a subunit of the HOPS complex and of the CORVET tethering complex; essen... 2 3 4.9% 3.14E-4 79271
[View Peptides]   IES1 Subunit of the INO80 chromatin remodeling complex 2 2 4.9% 2.09E-4 78753
[View Peptides]   SLM2 Phosphoinositide PI4,5P(2) binding protein, forms a complex with Slm1p; acts downstream of Mss4p in ... 2 2 4.9% 2.2E-4 74785
[View Peptides]   YAR009C Retrotransposon TYA Gag and TYB Pol genes; in YARCTY1-1 TYB is mutant and probably non-functional 2 2 4.7% 1.21E-4 136732
[View Peptides]   YJL070C Putative protein of unknown function with similarity to AMP deaminases; the authentic, non-tagged pr... 2 2 4.7% 1.63E-4 104264
[View Peptides]   gi|2507502 gi|2507502|sp|P37254|PABS_YEAST Para-aminobenzoate synthase (P-aminobenzoic acid synthase) (PABA syn... 2 2 4.7% 1.83E-4 88561
[View Peptides]   SDH1 Flavoprotein subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p), which couples the oxid... 2 3 4.7% 3.39E-4 70229
[View Peptides]   HFD1 Putative fatty aldehyde dehydrogenase, located in the mitochondrial outer membrane and also in lipid... 2 2 4.7% 2.72E-4 59979
[View Peptides]   TBS1 Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purifi... 2 2 4.6% 1.32E-4 126903
[View Peptides]   GCD6 Catalytic epsilon subunit of the translation initiation factor eIF2B, the guanine-nucleotide exchang... 2 2 4.6% 2.03E-4 81161
[View Peptides]   SVF1 Protein with a potential role in cell survival pathways, required for the diauxic growth shift; expr... 2 4 4.6% 6.01E-4 54368
[View Peptides]   PTC3 Type 2C protein phosphatase; dephosphorylates Hog1p (see also Ptc2p) to limit maximal kinase activit... 2 2 4.5% 3.09E-4 51390
[View Peptides]   YNL284C-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 6 7 4.4% 2.88E-4 198997
[View Peptides]   OAF1 Oleate-activated transcription factor, acts alone and as a heterodimer with Pip2p; activates genes i... 2 2 4.4% 1.36E-4 120692
[View Peptides]   RSC3 Component of the RSC chromatin remodeling complex; essential gene required for maintenance of proper... 2 2 4.4% 1.63E-4 101720
[View Peptides]   STO1 Large subunit of the nuclear mRNA cap-binding protein complex, interacts with Npl3p to carry nuclear... 2 3 4.4% 2.52E-4 100017
[View Peptides]   TOR1 PIK-related protein kinase and rapamycin target; subunit of TORC1, a complex that controls growth in... 7 7 4.3% 2.05E-4 281138
[View Peptides]   RPO21 RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapep... 5 5 4.3% 2.09E-4 191610
[View Peptides]   NUP145 Essential nucleoporin, catalyzes its own cleavage in vivo to generate a C-terminal fragment that ass... 3 3 4.3% 1.65E-4 145661
[View Peptides]   IMH1 Protein involved in vesicular transport, mediates transport between an endosomal compartment and the... 2 3 4.3% 2.38E-4 105225
[View Peptides]   NIC96 Component of the nuclear pore complex, required for nuclear pore formation; forms a subcomplex with ... 2 2 4.3% 1.72E-4 96174
[View Peptides]   gi|2498507, gi|1... gi|2498507|sp|Q92325|LAG2_YEAST Longevity-assurance protein 2, gi|1616989|gb|AAB16890.1| Lag2p 2 2 4.3% 2.13E-4 77541
[View Peptides]   RSC4 Component of the RSC chromatin remodeling complex; found in close proximity to nucleosomal DNA; disp... 2 2 4.3% 2.31E-4 72276
[View Peptides]   SAC1 Phosphatidylinositol phosphate (PtdInsP) phosphatase involved in hydrolysis of PtdIns[4]P; transmemb... 2 2 4.3% 2.32E-4 71125
[View Peptides]   TSC11 Subunit of TORC2 (Tor2p-Lst8p-Avo1-Avo2-Tsc11p-Bit61p), a membrane-associated complex that regulates... 3 3 4.2% 1.52E-4 164368
[View Peptides]   PAN1 Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, associates with actin patches on th... 3 4 4.2% 1.95E-4 160266
[View Peptides]   TFP1 Subunit A of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase; protein prec... 4 5 4.2% 3.38E-4 118637
[View Peptides]   BUD6 Actin- and formin-interacting protein, involved in actin cable nucleation and polarized cell growth;... 2 2 4.2% 1.83E-4 88817
[View Peptides]   DSL1 Peripheral membrane protein needed for Golgi-to-ER retrograde traffic; forms a complex with Sec39p a... 2 3 4.2% 2.88E-4 88072
[View Peptides]   GLK1 Glucokinase, catalyzes the phosphorylation of glucose at C6 in the first irreversible step of glucos... 2 2 4.2% 2.89E-4 55377
[View Peptides]   CAF130 Part of the evolutionarily-conserved CCR4-NOT transcriptional regulatory complex involved in control... 2 2 4.1% 1.29E-4 128780
[View Peptides]   SWI4 DNA binding component of the SBF complex (Swi4p-Swi6p), a transcriptional activator that in concert ... 3 3 4.1% 1.98E-4 123806
[View Peptides]   JIP4 Protein of unknown function; previously annotated as two separate ORFs, YDR474C and YDR475C, which w... 2 2 4.1% 1.65E-4 98691
[View Peptides]   BRE1 E3 ubiquitin ligase, forms heterodimer with Rad6p to monoubiquinate histone H2B-K123, which is requi... 2 2 4.1% 2.07E-4 80692
[View Peptides]   AZR1 Plasma membrane transporter of the major facilitator superfamily, involved in resistance to azole dr... 2 2 4.1% 2.36E-4 67169
[View Peptides]   APM3 Mu3-like subunit of the clathrin associated protein complex (AP-3); functions in transport of alkali... 2 2 4.1% 2.99E-4 54879
[View Peptides]   UBP15 Ubiquitin-specific protease that may play a role in ubiquitin precursor processing 3 4 4.0% 2.35E-4 143563
[View Peptides]   NUP120 Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), required for even distribution o... 3 4 4.0% 2.79E-4 120448
[View Peptides]   IRC8 Bud tip localized protein of unknown function; mRNA is targeted to the bud by a She2p dependent tran... 2 2 4.0% 1.76E-4 91256
[View Peptides]   GRS1 Cytoplasmic and mitochondrial glycyl-tRNA synthase that ligates glycine to the cognate anticodon bea... 2 2 4.0% 2.17E-4 75411
[View Peptides]   IKI3 Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA; main... 3 4 3.9% 2.14E-4 152990
[View Peptides]   HSP82 Hsp90 chaperone required for pheromone signaling and negative regulation of Hsf1p; docks with Tom70p... 2 2 3.9% 2.04E-4 81406
[View Peptides]   VID24 Peripheral membrane protein located at Vid (vacuole import and degradation) vesicles; regulates fruc... 2 2 3.9% 3.99E-4 41245
[View Peptides]   MLP2 Myosin-like protein associated with the nuclear envelope, connects the nuclear pore complex with the... 5 5 3.8% 2.15E-4 195140
[View Peptides]   gi|1326009 gi|1326009|emb|CAA87673.1| TYB protein [Saccharomyces cerevisiae] 3 3 3.8% 1.63E-4 151008
[View Peptides]   SNT1 Subunit of the Set3C deacetylase complex that interacts directly with the Set3C subunit, Sif2p; puta... 2 2 3.8% 1.18E-4 138397
[View Peptides]   MNR2 Vacuolar membrane protein required for magnesium homeostasis; putative magnesium transporter; has si... 2 2 3.8% 1.49E-4 109736
[View Peptides]   COG4 Essential component of the conserved oligomeric Golgi complex (Cog1p through Cog8p), a cytosolic tet... 2 2 3.7% 1.68E-4 98665
[View Peptides]   SYH1 Protein of unknown function that may interact with ribosomes, based on co-purification experiments; ... 2 2 3.7% 1.7E-4 94356
[View Peptides]   ERB1 Constituent of 66S pre-ribosomal particles, forms a complex with Nop7p and Ytm1p that is required fo... 2 2 3.7% 1.79E-4 91705
[View Peptides]   HS83_YEAST, HSC8... (P15108) ATP-dependent molecular chaperone HSC82 (Heat shock protein Hsp90 constitutive isoform) (82... 2 3 3.7% 3.08E-4 80769
[View Peptides]   SNF2 Catalytic subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation... 3 3 3.6% 1.27E-4 194050
[View Peptides]   VPS41 Vacuolar membrane protein that is a subunit of the homotypic vacuole fusion and vacuole protein sort... 2 5 3.6% 3.64E-4 113412
[View Peptides]   PUF4 Member of the PUF protein family, which is defined by the presence of Pumilio homology domains that ... 2 2 3.6% 1.63E-4 97798
[View Peptides]   COG6 Component of the conserved oligomeric Golgi complex (Cog1p through Cog8p), a cytosolic tethering com... 2 2 3.6% 1.72E-4 96976
[View Peptides]   YNL284C-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ... 2 3 3.6% 4.93E-4 49309
[View Peptides]   UFD4 Ubiquitin-protein ligase (E3) that interacts with Rpt4p and Rpt6p, two subunits of the 19S particle ... 2 3 3.5% 1.46E-4 167842
[View Peptides]   SPA2 Component of the polarisome, which functions in actin cytoskeletal organization during polarized gro... 3 4 3.5% 1.97E-4 163142
[View Peptides]   YOL075C Putative ABC transporter 2 2 3.5% 1.12E-4 145157
[View Peptides]   SMC1 Subunit of the multiprotein cohesin complex, essential protein involved in chromosome segregation an... 3 3 3.5% 1.77E-4 141280
[View Peptides]   BBC1 Protein possibly involved in assembly of actin patches; interacts with an actin assembly factor Las1... 2 2 3.5% 1.25E-4 128296
[View Peptides]   TAF1 TFIID subunit (145 kDa), involved in RNA polymerase II transcription initiation; possesses in vitro ... 2 2 3.5% 1.36E-4 120696
[View Peptides]   SEC3 Subunit of the exocyst complex (Sec3p, Sec5p, Sec6p, Sec8p, Sec10p, Sec15p, Exo70p, Exo84p) which me... 3 3 3.4% 1.62E-4 154694
[View Peptides]   NEW1 ATP binding cassette protein that cosediments with polysomes and is required for biogenesis of the s... 2 2 3.4% 1.21E-4 134331
[View Peptides]   RAD2 Single-stranded DNA endonuclease, cleaves single-stranded DNA during nucleotide excision repair to e... 2 6 3.4% 4.21E-4 117838
[View Peptides]   ALA1 Cytoplasmic and mitochondrial alanyl-tRNA synthetase, required for protein synthesis; point mutation... 2 3 3.4% 2.26E-4 107277
[View Peptides]   IRC20 Putative helicase; localizes to the mitochondrion and the nucleus; YLR247C is not an essential gene;... 3 3 3.3% 1.39E-4 180343
[View Peptides]   GIN4 Protein kinase involved in bud growth and assembly of the septin ring, proposed to have kinase-depen... 2 2 3.3% 1.27E-4 129858
[View Peptides]   STE12 Transcription factor that is activated by a MAP kinase signaling cascade, activates genes involved i... 2 2 3.3% 2.1E-4 77867
[View Peptides]   NGR1 RNA binding protein that negatively regulates growth rate; interacts with the 3' UTR of the mitochon... 2 2 3.3% 2.15E-4 75024
[View Peptides]   gi|2315262 gi|2315262|emb|CAA99092.1| IRA2 [Saccharomyces cerevisiae] 2 2 3.3% 1.32E-4 126813
[View Peptides]   UBR2 Cytoplasmic ubiquitin-protein ligase (E3); required for ubiquitylation of Rpn4p; mediates formation ... 3 3 3.2% 1.16E-4 216777
[View Peptides]   TRS120 One of 10 subunits of the transport protein particle (TRAPP) complex of the cis-Golgi which mediates... 3 3 3.2% 1.68E-4 147662
[View Peptides]   YFR016C Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th... 2 2 3.2% 1.17E-4 137698
[View Peptides]   NPR3 Component, with Npr2p, of an evolutionarily conserved complex that mediates downregulation of TOR Co... 2 2 3.2% 1.26E-4 129973
[View Peptides]   PEP5 Component of CORVET tethering complex; peripheral vacuolar membrane protein required for protein tra... 2 2 3.2% 1.41E-4 117477
[View Peptides]   ADE3 Cytoplasmic trifunctional enzyme C1-tetrahydrofolate synthase, involved in single carbon metabolism ... 2 2 3.2% 1.53E-4 102205
[View Peptides]   DUR1,2 Urea amidolyase, contains both urea carboxylase and allophanate hydrolase activities, degrades urea ... 2 2 3.1% 7.88E-5 201830
[View Peptides]   NUP188 Subunit of the nuclear pore complex (NPC), involved in the structural organization of the complex an... 3 3 3.0% 1.31E-4 188576
[View Peptides]   gi|1122342, gi|1... gi|1204150|emb|CAA92352.1| unknown [Saccharomyces cerevisiae], gi|1122342|emb|CAA92360.1| unknown [S... 2 2 3.0% 1.09E-4 151193
[View Peptides]   SWI1 Subunit of the SWI/SNF chromatin remodeling complex, which regulates transcription by remodeling chr... 2 2 3.0% 1.1E-4 147937
[View Peptides]   SLA2 Transmembrane actin-binding protein involved in membrane cytoskeleton assembly and cell polarization... 2 2 3.0% 1.49E-4 108911
[View Peptides]   GYP5 GTPase-activating protein (GAP) for yeast Rab family members, involved in ER to Golgi trafficking; e... 2 2 3.0% 1.62E-4 101800
[View Peptides]   GDE1 Glycerophosphocholine (GroPCho) phosphodiesterase; hydrolyzes GroPCho to choline and glycerolphospha... 2 3 2.9% 1.77E-4 138014
[View Peptides]   UTP10 Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA that is ... 3 3 2.8% 1.23E-4 200080
[View Peptides]   MLP1 Myosin-like protein associated with the nuclear envelope, connects the nuclear pore complex with the... 3 3 2.7% 1.16E-4 218454
[View Peptides]   INO80 ATPase, subunit of a complex containing actin and several actin-related proteins that has chromatin ... 2 3 2.7% 1.46E-4 171454
[View Peptides]   YPK9 Vacuolar protein with a possible role in sequestering heavy metals; has similarity to the type V P-t... 2 2 2.7% 9.82E-5 166749
[View Peptides]   URB2 Nucleolar protein required for normal metabolism of the rRNA primary transcript, proposed to be invo... 2 3 2.7% 1.85E-4 135117
[View Peptides]   TCB2 Bud-specific protein with a potential role in membrane trafficking; GFP-fusion protein migrates from... 2 2 2.7% 1.23E-4 132509
[View Peptides]   PEP3 Component of CORVET tethering complex; vacuolar peripheral membrane protein that promotes vesicular ... 2 2 2.7% 1.58E-4 107398
[View Peptides]   TAF2 TFIID subunit (150 kDa), involved in RNA polymerase II transcription initiation 2 2 2.6% 1.03E-4 161470
[View Peptides]   TRA1 Subunit of SAGA and NuA4 histone acetyltransferase complexes; interacts with acidic activators (e.g.... 6 6 2.5% 1.16E-4 433182
[View Peptides]   NUP159 Nucleoporin, subunit of the nuclear pore complex that is found exclusively on the cytoplasmic side, ... 2 2 2.5% 9.9E-5 158907
[View Peptides]   gi|1903280 gi|1903280|emb|CAA98620.1| USO1 [Saccharomyces cerevisiae] 2 2 2.5% 1.14E-4 147463
[View Peptides]   YCS4 Subunit of the condensin complex; required for establishment and maintenance of chromosome condensat... 2 2 2.5% 1.23E-4 132967
[View Peptides]   ECM10 Heat shock protein of the Hsp70 family, localized in mitochondrial nucleoids, plays a role in protei... 2 12 2.5% 0.00135 70085
[View Peptides]   PMD1 Protein with an N-terminal kelch-like domain, putative negative regulator of early meiotic gene expr... 2 3 2.4% 1.24E-4 195382
[View Peptides]   RAD50 Subunit of MRX complex, with Mre11p and Xrs2p, involved in processing double-strand DNA breaks in ve... 2 2 2.4% 1.1E-4 152568
[View Peptides]   YBL005W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 2 2 2.3% 8.24E-5 198968
[View Peptides]   YNL054W-B TyB Gag-Pol protein; proteolytically processed to make the Gag, RT, PR, and IN proteins that are req... 2 2 2.3% 8.27E-5 198197
[View Peptides]   YOR142W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces... 2 2 2.3% 8.24E-5 198535
[View Peptides]   CLU1 eIF3 component of unknown function; deletion causes defects in mitochondrial organization but not in... 2 2 2.3% 1.13E-4 145165
[View Peptides]   NUM1 Protein required for nuclear migration, localizes to the mother cell cortex and the bud tip; may med... 3 14 2.2% 3.68E-4 313032
[View Peptides]   SEN1 Presumed helicase required for RNA polymerase II transcription termination and processing of RNAs; h... 2 2 2.2% 6.48E-5 252495
[View Peptides]   SEC16 COPII vesicle coat protein required for ER transport vesicle budding; Sec16p is bound to the periphe... 2 2 2.1% 6.59E-5 241694
[View Peptides]   TOM1 E3 ubiquitin ligase of the hect-domain class; has a role in mRNA export from the nucleus and may reg... 3 3 2.0% 6.64E-5 374186
[View Peptides]   ECM29 Major component of the proteasome; tethers the proteasome core particle to the regulatory particle, ... 2 2 1.9% 7.74E-5 210430
[View Peptides]   THO2 Subunit of the THO complex, which is required for efficient transcription elongation and involved in... 2 2 1.7% 9.05E-5 183930
[View Peptides]   CAT8 Zinc cluster transcriptional activator necessary for derepression of a variety of genes under non-fe... 2 3 1.7% 1.51E-4 160485
[View Peptides]   BNI1 Formin, nucleates the formation of linear actin filaments, involved in cell processes such as buddin... 2 2 1.6% 7.4E-5 219701
[View Peptides]   UBR1 E3 ubiquitin ligase (N-recognin), forms heterodimer with Rad6p to ubiquitinate substrates in the N-e... 2 2 1.5% 7.42E-5 224836
[View Peptides]   PRP8 Component of the U4/U6-U5 snRNP complex, involved in the second catalytic step of splicing; mutation... 2 2 1.4% 5.99E-5 279502
[View Peptides]   gi|171762, gi|124890 gi|171762|gb|AAA34710.1| IRA2 protein (IRA2) [Saccharomyces cerevisiae], gi|124890|sp|P19158|IRA2_YE... 2 2 1.2% 4.7E-5 351638
[View Peptides]   POL1 Catalytic subunit of the DNA polymerase I alpha-primase complex, required for the initiation of DNA ... 2 2 1.2% 9.85E-5 166809
[View Peptides]   YLR422W Protein of unknown function with similarity to human DOCK proteins (guanine nucleotide exchange fact... 2 3 1.1% 1.12E-4 221562
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle