General Information: |
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Name(s) found: |
RCL1 /
YOL010W
[SGD]
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Description(s) found:
Found 26 descriptions. SHOW ALL |
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Organism: | Saccharomyces cerevisiae |
Length: | 367 amino acids |
Gene Ontology: |
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Cellular Component: |
nuclear outer membrane
[IMP![]() nucleolus [IDA ![]() |
Biological Process: |
ribosome biogenesis
[RCA![]() |
Molecular Function: |
[NOT]RNA-3'-phosphate cyclase activity
[ISS![]() ![]() molecular_function [ND] |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MSSSAPKYTT FQGSQNFRLR IVLATLSGKP IKIEKIRSGD LNPGLKDYEV SFLRLIESVT 60 61 NGSVIEISYT GTTVIYRPGI IVGGASTHIC PSSKPVGYFV EPMLYLAPFS KKKFSILFKG 120 121 ITASHNDAGI EAIKWGLMPV MEKFGVRECA LHTLKRGSPP LGGGEVHLVV DSLIAQPITM 180 181 HEIDRPIISS ITGVAYSTRV SPSLVNRMID GAKKVLKNLQ CEVNITADVW RGENSGKSPG 240 241 WGITLVAQSK QKGWSYFAED IGDAGSIPEE LGEKVACQLL EEISKSAAVG RNQLPLAIVY 300 301 MVIGKEDIGR LRINKEQIDE RFIILLRDIK KIFNTEVFLK PVDEADNEDM IATIKGIGFT 360 361 NTSKKIA |
  | PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS |
View Details | Riffle et al. (2010) (Unpublished Data) |
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BMS1 ECM16 KRR1 MPP10 RCL1 UTP20 |
View Details | Krogan NJ, et al. (2006) |
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BMS1 BPL1 RCL1 RNT1 SMF3 |
View Details | Gavin AC, et al. (2002) |
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ADE4 ADH1 ASC1 BEM2 BFR2 BMS1 BRX1 BUD21 CBF5 CKA1 CKA2 CKB1 CKB2 CMS1 DBP8 DIA4 DIM1 DIP2 DIS3 ECM16 ECM29 EMG1 ENP1 ENP2 ERO1 ESF1 ESF2 FAP7 GCN1 HCA4 HHF1, HHF2 HRR25 HSL1 HTA2 IMP3 IMP4 KRE33 KRR1 LCP5 LTV1 MPP10 MRD1 MVD1 NAN1 NOB1 NOC2 NOC4 NOP1 NOP14 NOP56 NOP58 NOP6 PNO1 PRE6 PRE9 PRP43 PWP2 RCL1 RIO2 RML2 ROK1 RPP2B RRP12 RRP7 RRP9 RTG2 SAM1 SCL1 SEC21 SLX9 SNF2 SNF5 SOF1 SWI3 TIF1, TIF2 TSR1 UTP10 UTP11 UTP13 UTP15 UTP18 UTP20 UTP21 UTP22 UTP30 UTP4 UTP6 UTP7 UTP8 UTP9 YGR054W YOR059C |
View Details | Ho Y, et al. (2002) |
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APL2 APL4 APM1 BRX1 CIC1 KRI1 KRR1 NMA1 NOG1 NOP4 PAB1 PWP1 RCL1 TIF6 TUF1 |
View Details | Qiu et al. (2008) |
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BRX1 DBP6 DBP7 GAR1 KRI1 KRR1 NOP15 NUG1 RCL1 RPF2 RPL27A TIF6 UTP5 UTP8 UTP9 YBL028C |
The following runs contain data for this protein:
  | BAIT | COMMENTS | PUBLICATION |
View Run | Sample 2- cpn2 from june 2005 | McCusker D, et al (2007) | |
View Run | #32 Asynchronous Prep-No Phosphopeptide enrichment | Keck JM, et al. (2011) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
BAIT | PREY | HITS | PUBLICATION | |
View Screen | 2 | Unpublished Fields Lab Data | ||
View Screen | 2 | Unpublished Fields Lab Data | ||
View Screen | 2 | Unpublished Fields Lab Data |
New Feature: Upload Your Own Microscopy Data
  | PROTEIN(S) | PUBLICATION |
View Data |
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Huh WK, et al. (2003) |
View Data |
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Huh WK, et al. (2003) |
Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..81] | ![]() |
149.24799 | RNA 3'-terminal phosphate cyclase, RPTC, insert domain; RNA 3'-terminal phosphate cyclase, RPTC |
2 | View Details | [82..177] | ![]() |
149.24799 | RNA 3'-terminal phosphate cyclase, RPTC, insert domain; RNA 3'-terminal phosphate cyclase, RPTC |
3 | View Details | [178..367] | ![]() |
149.24799 | RNA 3'-terminal phosphate cyclase, RPTC, insert domain; RNA 3'-terminal phosphate cyclase, RPTC |
Functions predicted (by domain):
# | Gene Ontology predictions | ||||||||||||
1 |
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2 | No functions predicted. | ||||||||||||
3 | No functions predicted. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.98 |
Source: Reynolds et al. (2008)