General Information: |
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Name(s) found: |
PAB1 /
YER165W
[SGD]
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Description(s) found:
Found 30 descriptions. SHOW ALL |
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Organism: | Saccharomyces cerevisiae |
Length: | 577 amino acids |
Gene Ontology: |
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Cellular Component: |
nucleus
[IDA![]() cytoplasm [IDA ![]() ribosome [IDA ![]() |
Biological Process: |
regulation of translational initiation
[IDA![]() ![]() |
Molecular Function: |
poly(A) RNA binding
[IDA![]() ![]() |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MADITDKTAE QLENLNIQDD QKQAATGSES QSVENSSASL YVGDLEPSVS EAHLYDIFSP 60 61 IGSVSSIRVC RDAITKTSLG YAYVNFNDHE AGRKAIEQLN YTPIKGRLCR IMWSQRDPSL 120 121 RKKGSGNIFI KNLHPDIDNK ALYDTFSVFG DILSSKIATD ENGKSKGFGF VHFEEEGAAK 180 181 EAIDALNGML LNGQEIYVAP HLSRKERDSQ LEETKAHYTN LYVKNINSET TDEQFQELFA 240 241 KFGPIVSASL EKDADGKLKG FGFVNYEKHE DAVKAVEALN DSELNGEKLY VGRAQKKNER 300 301 MHVLKKQYEA YRLEKMAKYQ GVNLFVKNLD DSVDDEKLEE EFAPYGTITS AKVMRTENGK 360 361 SKGFGFVCFS TPEEATKAIT EKNQQIVAGK PLYVAIAQRK DVRRSQLAQQ IQARNQMRYQ 420 421 QATAAAAAAA AGMPGQFMPP MFYGVMPPRG VPFNGPNPQQ MNPMGGMPKN GMPPQFRNGP 480 481 VYGVPPQGGF PRNANDNNQF YQQKQRQALG EQLYKKVSAK TSNEEAAGKI TGMILDLPPQ 540 541 EVFPLLESDE LFEQHYKEAS AAYESFKKEQ EQQTEQA |
  | PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS |
View Details | (MIPS) Mewes HW, et al. (2004) |
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CDC33 PAB1 TIF4631 |
View Details | Gavin AC, et al. (2006) |
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BOI1 NAB6 PAB1 PAN2 YGR250C |
View Details | Ho Y, et al. (2002) |
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ACS2 ADE3 ADE6 ADO1 ALA1 APE2 APL2 APL4 APM1 ARA1 BAT1 BRX1 CDC10 CIC1 CLU1 CYS3 DED81 DPS1 ERG10 ERG20 GCY1 GPH1 GRS1 HOM2 HYP2 ILS1 IMD3 KRI1 KRR1 KRS1 LSP1 MDH3 NMA1 NOG1 NOP4 OLA1 PAB1 PFK2 PGM2 PMI40 PRP6 PWP1 RCL1 SAC6 SCP160 SOD1 SSZ1 THR4 TIF6 TRR1 TUF1 UBA1 YDL124W |
View Details | Qiu et al. (2008) |
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PAB1 PRP2 PRP43 |
The following runs contain data for this protein:
  | BAIT | COMMENTS | PUBLICATION |
View Run | No Comments | Reinke A, et al. (2004) | |
View Run | No Comments | McCusker D, et al (2007) | |
View Run | No Comments | Reinke A, et al. (2004) | |
View Run | No Comments | Reinke A, et al. (2004) | |
View Run | No Comments | Reinke A, et al. (2004) | |
View Run | No Comments | De Craene, J., et al. (2006) | |
View Run | Dam1 complex purified from yeast with Dad1-TAP | Shimogawa MM, et al. (2006) | |
View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
View Run | control 1 | McCusker D, et al (2007) | |
View Run | cac1: TAP-tagged | Green EM, et al (2005) | |
View Run | Dam1-765 complex purified from yeast with Dad1-TAP | Shimogawa MM, et al. (2006) | |
View Run | Dam1 complex purified from yeast with Dad1-TAP | Shimogawa MM, et al. (2006) | |
View Run | Sample: HX14 - mixture in detergent (control). | Hao Xu, et al. (2010) | |
View Run | #19 Asynchronous Prep1-TiO2 Phosphopeptide enrichment | Keck JM, et al. (2011) | |
View Run | #26 Asynchronous Prep4-TiO2 Phosphopeptide enriched, Steps1-2 | Keck JM, et al. (2011) | |
View Run | #32 Asynchronous Prep-No Phosphopeptide enrichment | Keck JM, et al. (2011) | |
View Run | #31 Asynchronous Prep (Protease cleavage) | Keck JM, et al. (2011) | |
View Run | #03 Alpha Factor Prep1-TiO2 Flowthrough | Keck JM, et al. (2011) | |
View Run | #10 Mitotic Prep1-TiO2 Phosphopeptide enrichment | Keck JM, et al. (2011) | |
View Run | #06 Alpha Factor Prep3-TiO2 Phosphopeptide enrichment | Keck JM, et al. (2011) | |
View Run | #19b Asynchronous Prep1-new search criteria | Keck JM, et al. (2011) | |
View Run | #19a Asynchronous Prep1-new search criteria | Keck JM, et al. (2011) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
New Feature: Upload Your Own Microscopy Data
  | PROTEIN(S) | PUBLICATION |
View Data |
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Huh WK, et al. (2003) |
Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..116] | ![]() |
653.927757 | Poly(A)-binding protein |
2 | View Details | [117..215] | ![]() |
653.927757 | Poly(A)-binding protein |
3 | View Details | [216..307] | ![]() |
128.31133 | Nuclear ribonucleoprotein A1 (RNP A1, UP1) |
4 | View Details | [308..432] | ![]() |
128.31133 | Nuclear ribonucleoprotein A1 (RNP A1, UP1) |
5 | View Details | [433..485] | ![]() |
N/A | No confident structure predictions are available. |
6 | View Details | [486..577] | ![]() |
390.67837 | poly(A) binding protein |
Functions predicted (by domain):
# | Gene Ontology predictions | ||||||
1 |
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2 | No functions predicted. | ||||||
3 | No functions predicted. | ||||||
4 | No functions predicted. | ||||||
5 | No functions predicted. | ||||||
6 | No functions predicted. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.86 |
Source: Reynolds et al. (2008)