General Information: |
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Name(s) found: |
PAN2 /
YGL094C
[SGD]
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Description(s) found:
Found 28 descriptions. SHOW ALL |
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Organism: | Saccharomyces cerevisiae |
Length: | 1115 amino acids |
Gene Ontology: |
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Cellular Component: |
PAN complex
[IDA]
cytoplasm [IDA] |
Biological Process: |
mRNA 3'-end processing
[IMP][IPI]
mRNA processing [IMP][IPI] postreplication repair [IGI][IPI] |
Molecular Function: |
poly(A)-specific ribonuclease activity
[IDA][TAS]
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Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MNNWQHFFNN PVDLSEHLKK PYFRFDNRDK EITAISFDEK ANLIWSGDSY GCISSYDPTF 60 61 QLYTRYRGHI GGNSVKDILS HRDGILSISE DSLHFANRRG VTKLNLTSID IAAFSELNTM 120 121 CYSPHSLKNN IYCGGDNTNW GIASIDLNRG CLDSLLNYSS KVKLMCSNNK VLSIGRQTGT 180 181 VDLLDPTSNR TIKSFNAHSA SISAMDLRDN TLVTVGKSKR FYNLYADPFV NVYDLRTMRQ 240 241 LPPVSFSKGT TMGSGGADFV QLHPLLPTVM IVASSSGSFD FIDLSNPTLR TQYVHPCQSI 300 301 KKLCLSPNGD VLGILEADNH LDTWRRSSNN MGMFTNTPEM LAYPDYFNDI TSDGPISVDD 360 361 ETYPLSSVGM PYYLDKLLSA WPPVVFKSEG TIPQLTGKSP LPSSGKLKSN LAVISSQNEK 420 421 LSTQEFPLLR YDRTKYGMRN AIPDYVCLRD IRKQITSGLE TSDIQTYTSI NKYEVPPAYS 480 481 RLPLTSGRFG TDNFDFTPFN NTEYSGLDPD VDNHYTNAII QLYRFIPEMF NFVVGCLKDE 540 541 NFETTLLTDL GYLFDMMERS HGKICSSSNF QASLKSLTDK RQLENGEPQE HLEEYLESLC 600 601 IRESIEDFNS SESIKRNMPQ KFNRFLLSQL IKEEAQTVNH NITLNQCFGL ETEIRTECSC 660 661 DHYDTTVKLL PSLSISGINK TVIKQLNKKS NGQNILPYIE YAMKNVTQKN SICPTCGKTE 720 721 TITQECTVKN LPSVLSLELS LLDTEFSNIR SSKNWLTSEF YGSIIKNKAV LRSTASELKG 780 781 TSHIFKYELN GYVAKITDNN NETRLVTYVK KYNPKENCFK WLMFNDYLVV EITEEEALKM 840 841 TYPWKTPEII IYCDAEELRK PFFSVDTYSI NYDILFRDYF ANGIRDTARR EYKLLTHDEA 900 901 PKSGTLVAID AEFVSLQSEL CEIDHQGIRS IIRPKRTALA RISIIRGEEG ELYGVPFVDD 960 961 YVVNTNHIED YLTRYSGILP GDLDPEKSTK RLVRRNVVYR KVWLLMQLGC VFVGHGLNND1020 1021 FKHININVPR NQIRDTAIYF LQGKRYLSLR YLAYVLLGMN IQEGNHDSIE DAHTALILYK1080 1081 KYLHLKEKAI FEKVLNSVYE EGRAHNFKVP ETSKG |
  | PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS |
View Details | Riffle et al. (2010) (Unpublished Data) | PAN2 PAN3 | |
View Details | Krogan NJ, et al. (2006) | PAN2 PAN3 | |
View Details | Gavin AC, et al. (2006) | PAB1 PAN2 PAN3 | |
View Details | Gavin AC, et al. (2002) | PAN2 PAN3 | |
View Details | Qiu et al. (2008) | PAN2 PAN3 |
The following runs contain data for this protein:
  | BAIT | COMMENTS | PUBLICATION |
View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
View Run | sample cbf3 from feb 2005 | Sandall S, et all (2006) | |
View Run | No Comments | Schneider, DA, et al. (2006) | |
View Run | Sample 3 - cpn + atp, from june 2005 | McCusker D, et al (2007) | |
View Run | #19 Asynchronous Prep1-TiO2 Phosphopeptide enrichment | Keck JM, et al. (2011) | |
View Run | #25 Asynchronous Prep3-TiO2 Flowthrough | Keck JM, et al. (2011) | |
View Run | #19b Asynchronous Prep1-new search criteria | Keck JM, et al. (2011) | |
View Run | #19a Asynchronous Prep1-new search criteria | Keck JM, et al. (2011) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
New Feature: Upload Your Own Microscopy Data
  | PROTEIN(S) | PUBLICATION |
View Data |
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Huh WK, et al. (2003) |
Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..395] | 75.522879 | beta1-subunit of the signal-transducing G protein heterotrimer | |
2 | View Details | [396..468] | N/A | No confident structure predictions are available. | |
3 | View Details | [469..895] | 58.218995 | View MSA. No confident structure predictions are available. | |
4 | View Details | [896..1115] | 7.52 | Exonuclease I |
Functions predicted (by domain):
# | Gene Ontology predictions | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1 | No functions predicted. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
2 | No functions predicted. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
3 | No functions predicted. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
4 |
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Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.97 |
Source: Reynolds et al. (2008)