| General Information: |
|
| Name(s) found: |
PAN3 /
YKL025C
[SGD]
|
| Description(s) found:
Found 24 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 679 amino acids |
Gene Ontology: |
|
| Cellular Component: |
PAN complex
[IDA ]
cytoplasm [IDA ]
|
| Biological Process: |
DNA repair
[IDA]
mRNA 3'-end processing [IMP ][IPI]
postreplication repair [IGI ][IPI]
|
| Molecular Function: |
poly(A)-specific ribonuclease activity
[IDA]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MDKINPDWAK DIPCRNITIY GYCKKEKEGC PFKHSDNTTA TTINDVPPPI DVGEATTPTM 60
61 TSVPKFNAKV SASFTPMTVG SDSLTTVTNT TSAATNATGN IAMAATSATA STVNPMINPI 120
121 VNSSLVNNNN NNSNISISIP TTASSSNYDP FNAPIFTPSS TSSIHTNANA HSFPFPSIAN 180
181 SGGININATD DNSNNMSMAN NVPPPMQPPP IESSNLKYPR IYPPPHSLLQ YHLYAPEQPS 240
241 SLKSLLKPNE RSADQLFIPN NIREDLTKKN LSILQVFPSS GKVIPSIVQD YFNLVPLNFN 300
301 NNDFLNKTTL FKVFSNYDGK AYVLKRLPNI DKSMNPNKIS KIYQIWSKIN CTNLIKFRDI 360
361 FQTTKFGDLS ICLVFDYYPN SLSLYDYHFV NFPKFPITNN YLWIYLVQLT NVINSIHSQN 420
421 LSIGNTLNWR KVLITGDPGR IKLSHCNFMD LLFNDDTDTV VSSGGSTIEG QQQLDYKYLG 480
481 ELLFNLSINI ENSNNNTAPK EYRLEEITPQ SIDDMRQIDD KFKDVLKYLI SDNGDSKKSI 540
541 HDLTSHFYDK MFMVLESSQT YTEYMESVLS RELENGRLFR LVNKLNCIFG RIESRIDINW 600
601 SESGTKFPII LFYDYVFHQV DSNGKPIMDL THVLRCLNKL DAGIQEKLML VTPDELNCII 660
661 ISYKELKDLI ESTFRSITQ |
| PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS | |
| View Details | Riffle et al. (2010) (Unpublished Data) |
|
PAN2 PAN3 |
| View Details | Krogan NJ, et al. (2006) |
|
PAN2 PAN3 |
| View Details | Gavin AC, et al. (2006) |
|
PAN2 PAN3 |
| View Details | Gavin AC, et al. (2002) |
|
PAN2 PAN3 |
| View Details | Qiu et al. (2008) |
|
PAN2 PAN3 |
The following runs contain data for this protein:
| BAIT | COMMENTS | PUBLICATION | |
| View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
| View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
| View Run | No Comments | Schneider, DA, et al. (2006) | |
| View Run | #03 Alpha Factor Prep1-TiO2 Flowthrough | Keck JM, et al. (2011) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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| PROTEIN(S) | PUBLICATION | |
| View Data |
|
Huh WK, et al. (2003) |
Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..224] |  |
N/A | No confident structure predictions are available. |
| 2 | View Details | [225..382] [567..585] |
|
82.221849 | Calmodulin-dependent protein kinase |
| 3 | View Details | [383..566] | |
82.221849 | Calmodulin-dependent protein kinase |
| 4 | View Details | [586..679] | |
5.30103 | Troponin C |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.98 |
Source: Reynolds et al. (2008)