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Protein Overview: NAB6

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run CAB4 No Comments Hazbun TR, et al. (2003)
View Run ASF1 3908: TAP-tagged, includes hir2(delta) in background Green EM, et al (2005)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data NAB6 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..118]
[136..161]
[442..501]
ORFEUS 7.82 Adenovirus hexon
2 View Details [119..135]
[162..287]
[325..350]
ORFEUS 7.82 Adenovirus hexon
3 View Details [288..324]
[351..441]
[502..552]
ORFEUS 7.82 Adenovirus hexon
4 View Details [553..636] ORFEUS 7.97 Baseplate structural protein gp27
5 View Details [637..726] PSI-BLAST 36.0 Hu antigen D (Hud)
6 View Details [727..846] PSI-BLAST 36.0 Hu antigen D (Hud)
7 View Details [847..909] deduced N/A No confident structure predictions are available.
8 View Details [910..1077] MSA 1.121988 View MSA. No confident structure predictions are available.
9 View Details [1078..1134] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • binding
  • 1.46194714498106 bayes_pls_golite062009
  • nucleic acid binding
  • 0.889591023319018 bayes_pls_golite062009
  • RNA binding
  • 0.535898980134848 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.
    7 No functions predicted.
    8 No functions predicted.
    9 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle