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Protein Overview: LHP1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run RPA135 No Comments Schneider, DA, et al. (2006)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data LHP1 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..107] PSI-BLAST 27.522879 Poly(A)-binding protein
2 View Details [108..275] PSI-BLAST 27.522879 Poly(A)-binding protein

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • RNA binding
  • 4.46119712758726 bayes_pls_golite062009
  • nucleic acid binding
  • 3.81920018903278 bayes_pls_golite062009
  • mRNA binding
  • 3.05425904007847 bayes_pls_golite062009
  • binding
  • 3.05116833253954 bayes_pls_golite062009
  • 2.36751082234253 bayes_pls_golite062009
  • transcription regulator activity
  • 1.07788694919471 bayes_pls_golite062009
  • DNA binding
  • 0.978604858165557 bayes_pls_golite062009
  • single-stranded RNA binding
  • 0.852368751354665 bayes_pls_golite062009
  • ligase activity
  • 0.633198446266208 bayes_pls_golite062009
  • poly-pyrimidine tract binding
  • 0.56829350502235 bayes_pls_golite062009
  • protein binding
  • 0.42571879933058 bayes_pls_golite062009
  • transcription factor activity
  • 0.234742017105535 bayes_pls_golite062009
  • snoRNA binding
  • 0.13655584674226 bayes_pls_golite062009
  • structural molecule activity
  • 0.0823205596024605 bayes_pls_golite062009
    2 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle