General Information: |
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Name(s) found: |
NOP13 /
YNL175C
[SGD]
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Description(s) found:
Found 20 descriptions. SHOW ALL |
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Organism: | Saccharomyces cerevisiae |
Length: | 403 amino acids |
Gene Ontology: |
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Cellular Component: |
nucleolus
[IDA![]() nucleoplasm [IDA ![]() |
Biological Process: |
ribosome biogenesis
[RCA![]() |
Molecular Function: |
RNA binding
[ISS![]() |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MSETELSKED AVTKKDNEEQ VKKALLDPTK KRKAEDEIEI DLKSSIPLSK KQKRLLRRGK 60 61 VTLEELNAKY NIDPKSIEEY KEDAEKKKSG ASEKDAQGEE STINTPTGDE SGEVVKKKKK 120 121 DENKYGVWIG NLSFDTTKDD LVRFFIAKTK DNEDEKSRVT EQDITRLSMP RVAAKNSNAM 180 181 KNKGFCYMFF KNVEQMKAVL ELSESHLNGR NMLIKDSENY SGRPDKDDLV AMSKNPPSRI 240 241 LFVGNLSFDV TDDLLRKHFQ HCGDIVKIRM ATFEDSGKCK GFAFIDFKNE EGSTNELKDK 300 301 SCRKIAGRPL RMEYGEDRSK RQVRKKVENV SRNNSSSFDI SNNKGYDRAG QDNGSKPEYK 360 361 RSNANRRPPV DSNNRTKSSV ALATAQRGSA AIVPSQGKKV KFD |
  | PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS |
View Details | Krogan NJ, et al. (2006) |
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AEP3 CDC20 FAB1 FOL2 GZF3 LSP1 NOP13 PIL1 PKH1 PRP16 PSK2 RGC1 RPL9B YLR179C YMR086W YTA6 |
View Details | Gavin AC, et al. (2006) |
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DBP10 DBP9 FPR4 NOP13 NOP4 PUF6 RIX7 RLP7 |
View Details | Ho Y, et al. (2002) |
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AFG2 ALB1 ARX1 BUD20 CDC5 CIC1 DBP7 DRS1 EBP2 EHD3 FYV4 HHF1, HHF2 HTA1 HTB1 HTB2 IMD2 IMD3 IRR1 IVY1 KAP95 KRI1 LHP1 MAM33 MCD1 MNP1 MRPS16 MSS116 NMD3 NOC2 NOG1 NOP12 NOP13 NOP4 NOP7 NSA2 NUG1 PRP43 PUF6 PWP1 RIX1 RRP5 RSM24 RSM25 SMC1 SMC3 SPC72 SRP1 TIF4631 YBL044W |
View Details | Qiu et al. (2008) |
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CIC1 DBP2 DBP3 DBP7 DHR2 DRS1 FPR4 GAR1 KRR1 MAK5 MRT4 NOP12 NOP13 NOP15 NOP4 NSR1 NUG1 PRP43 RNT1 RPL15B RPL27A RPL7B RRP9 SPB4 UTP10 UTP13 UTP15 UTP4 UTP5 UTP9 |
The following runs contain data for this protein:
  | BAIT | COMMENTS | PUBLICATION |
View Run | No Comments | Toshima J, et al (2006) | |
View Run | #12 Mitotic Prep1-TiO2 Flowthrough | Keck JM, et al. (2011) | |
View Run | #02 Alpha Factor Prep1-TiO2 enriched, new search criteria | Keck JM, et al. (2011) | |
View Run | #11 Mitotic Prep1-TiO2 enriched, new search criteria | Keck JM, et al. (2011) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
New Feature: Upload Your Own Microscopy Data
  | PROTEIN(S) | PUBLICATION |
View Data |
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Huh WK, et al. (2003) |
View Data |
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Huh WK, et al. (2003) |
Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..112] | ![]() |
75.218487 | Poly(A)-binding protein |
2 | View Details | [113..227] | ![]() |
113.512579 | Nuclear ribonucleoprotein A1 (RNP A1, UP1) |
3 | View Details | [228..328] | ![]() |
113.512579 | Nuclear ribonucleoprotein A1 (RNP A1, UP1) |
4 | View Details | [329..403] | ![]() |
34.39794 | Sex-lethal protein |
Functions predicted (by domain):
# | Gene Ontology predictions | |||||||||||||||||||||||||||||||||||||||||||||
1 |
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2 |
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3 | No functions predicted. | |||||||||||||||||||||||||||||||||||||||||||||
4 | No functions predicted. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)