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Protein Overview: YTA6

General Information:
Name(s) found: YTA6 / YPL074W [SGD]
Description(s) found:
Found 23 descriptions.
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  • Putative ATPase of the CDC48/PAS1/SEC18 (AAA) family, localized to the cortex of mother cells but not to daughter cells [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 754 amino acids

    Gene Ontology:
    Cellular Component: cell cortex [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: ATPase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHEKFSIPE NFTLAQSLQL LYSVVKNQYK NLADLIINSK GNKDTVTYGK IHKNLDTLLV  60
   61 YVNEGLRKIE KTYTLKKGLG NLVVDHPELR SIIEDFQILG QDIRIARRKA ETLMAEGNGS 120
  121 PSLSSSSSVL GLGTGNGLRF PKLWRMGSKR DKLKEADEKE AKINKQADNI RRARKLEEEK 180
  181 KLGAKLQYER DLELQREKLI ELKVKEKVEF EVAQKLEEER VKREEEERKH REQAEKKRIS 240
  241 TLKHERKTNY KSRASLDNFS SSSKSSGKID NSLIKRRSLD VVRTSGERVR TPVRKSMEAA 300
  301 EIGMAAQLAW SQYQNGANHS KVSNNGSHSN ELQIRYKPTP PLKKRYDYKK PTVNRPIIKS 360
  361 PTLNRQNSKS SRNIPTNSKL KASKSNTNKV SRRNEQNLEP SSPVLVSATA VPAESKPMRS 420
  421 KSGTPDKESS ASSSLDSRKE DILKSVQGVD RNACEQILNE ILVTDEKVYW EDIAGLRNAK 480
  481 NSLKEAVVYP FLRPDLFKGL REPVRGMLLF GPPGTGKTMI AKAVATESNS TFFSVSASSL 540
  541 LSKYLGESEK LVRALFYMAK KLSPSIIFID EIDSMLTARS DNENESSRRI KTELLIQWSS 600
  601 LSSATAQSED RNNTLDSRVL VLGATNLPWA IDDAARRRFS RKLYIPLPDY ETRLYHLKRL 660
  661 MAKQKNSLQD LDYELITEMT EGFSGSDLTS LAKEAAMEPI RDLGDKLMFA DFDKIRGIEI 720
  721 KDFQNALLTI KKSVSSESLQ KYEEWSSKFG SNGS

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) AEP3 CDC20 FAB1 FOL2 GZF3 LSP1 NOP13 PIL1 PKH1 PRP16 PSK2 RGC1 RPL9B YLR179C YMR086W YTA6
    View Details Ho Y, et al. (2002) LSP1 PIL1 TOP2 YTA6

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YTA6 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..215] MSA 2.109996 View MSA. No confident structure predictions are available.
    2 View Details [216..374] PSI-BLAST 43.927757 N-terminal, ClpS-binding domain of ClpA, an Hsp100 chaperone; ClpA, an Hsp100 chaperone, AAA+ modules
    3 View Details [375..518] PSI-BLAST 43.927757 N-terminal, ClpS-binding domain of ClpA, an Hsp100 chaperone; ClpA, an Hsp100 chaperone, AAA+ modules
    4 View Details [519..647] PSI-BLAST 482.24799 Membrane fusion atpase p97 N-terminal domain , P97-Nn; Membrane fusion atpase p97, D1 domain; Membrane fusion atpase p97 domain 2, P97-Nc
    5 View Details [648..754] PSI-BLAST 482.24799 Membrane fusion atpase p97 N-terminal domain , P97-Nn; Membrane fusion atpase p97, D1 domain; Membrane fusion atpase p97 domain 2, P97-Nc


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle