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Protein Overview: HEK2

Protein Complex Data

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen YPI1 HEK2 2 Hazbun TR, et al. (2003)

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data HEK2 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..42]
[165..238]
PSI-BLAST 36.30103 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3; S1 RNA-binding domain of polyribonucleotide phosphorylase, PNPase; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 1 and 4; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 6; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5
2 View Details [43..164]
[239..381]
PSI-BLAST 36.30103 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3; S1 RNA-binding domain of polyribonucleotide phosphorylase, PNPase; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 1 and 4; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 6; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • transcription regulator activity
  • 3.9432182987214 bayes_pls_golite062009
  • structural constituent of ribosome
  • 3.63349555627235 bayes_pls_golite062009
  • structural molecule activity
  • 3.43604616110432 bayes_pls_golite062009
  • nucleic acid binding
  • 2.14875774646095 bayes_pls_golite062009
  • binding
  • 1.9759530321894 bayes_pls_golite062009
  • nucleotidyltransferase activity
  • 1.69410216708845 bayes_pls_golite062009
  • DNA binding
  • 1.688021219058 bayes_pls_golite062009
  • deacetylase activity
  • 1.09789613642093 bayes_pls_golite062009
  • exonuclease activity
  • 1.02947145936572 bayes_pls_golite062009
  • transcription termination factor activity
  • 1.01912880224809 bayes_pls_golite062009
  • exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
  • 0.96549462572212 bayes_pls_golite062009
  • ribonuclease activity
  • 0.75307991342421 bayes_pls_golite062009
  • protein binding
  • 0.523813050066193 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 0.499351238958464 bayes_pls_golite062009
  • 3'-5'-exoribonuclease activity
  • 0.48105441429954 bayes_pls_golite062009
  • 3'-5' exonuclease activity
  • 0.477960254167 bayes_pls_golite062009
  • exoribonuclease activity, producing 5'-phosphomonoesters
  • 0.36703663415044 bayes_pls_golite062009
  • exoribonuclease activity
  • 0.350394896843651 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
  • 0.337324481645901 bayes_pls_golite062009
  • DNA-(apurinic or apyrimidinic site) lyase activity
  • 0.288026663667102 bayes_pls_golite062009
  • RNA binding
  • 0.24714225183821 bayes_pls_golite062009
  • kinase activity
  • 0.237670019875888 bayes_pls_golite062009
  • damaged DNA binding
  • 0.16864489654021 bayes_pls_golite062009
  • catalytic activity
  • 0.10089766806364 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 0.0869020377778909 bayes_pls_golite062009
  • pyrophosphatase activity
  • 0.0193674670513169 bayes_pls_golite062009
    2 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle