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Protein Overview: CBF5

Protein Complex Data

  PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
View Details Riffle et al. (2010) (Unpublished Data) CBF5 FUN12 HAS1 IMP4 KEM1 KRE33 KRR1 MRP7 MSS116 NOP1 NOP56 NOP58 NOP6 PUF6 PWP1 RBG1 RPL15A RPS4B, RPS4A RRP12 SBP1 SRO9 STM1 TIF4631 URB1 UTP10 UTP20 UTP22 YMR310C
View Details Hazbun TR, et al. (2003) CBF5 NAF1
View Details (MIPS) Mewes HW, et al. (2004) ASE1 ATG4 ATG8 BIK1 BIM1 CBF5 CIN2 CIN4 MHP1 RBL2 SPC98 STU1 STU2 YTM1
View Details Krogan NJ, et al. (2006) CBF5 JJJ1 PDS1 YPL009C
View Details Gavin AC, et al. (2002) AAR2 ADE4 ADH1 ASC1 BEM2 BFR2 BMS1 BRX1 BUD21 CBF5 CDC33 CFT2 CIC1 CKA1 CKA2 CKB1 CKB2 CMS1 DBP2 DBP8 DBP9 DIA4 DIM1 DIP2 DIS3 DRS1 ECM16 ECM29 EMG1 ENP1 ENP2 ERB1 ERO1 ESF1 ESF2 FAP7 FIP1 FUN12 GAR1 GCN1 GLC7 HAS1 HCA4 HEK2 HHF1, HHF2 HRR25 HSL1 HTA2 IMP3 IMP4 KRE33 KRR1 LCP5 LHP1 LTV1 MAK21 MDN1 MIS1 MPP10 MRD1 MRP7 MVD1 NAB6 NAN1 NHP2 NIP1 NOB1 NOC2 NOC4 NOG1 NOP1 NOP12 NOP14 NOP2 NOP4 NOP56 NOP58 NOP6 NOP7 NUG1 PAP1 PFS2 PNO1 POL2 PRE6 PRE9 PRP4 PRP43 PRT1 PTA1 PTI1 PUF6 PUS7 PWP2 RBG1 RCL1 REF2 RIO2 RLP7 RML2 RNA14 ROK1 ROM2 RPP2B RRP12 RRP7 RRP9 RTG2 SAM1 SBP1 SCL1 SEC21 SLX9 SMB1 SNF2 SNF5 SNP1 SNU114 SNU66 SOF1 SRO9 STM1 STO1 SUI3 SWI3 TIF1, TIF2 TIF4631 TIF4632 TSR1 URB1 UTP10 UTP11 UTP13 UTP15 UTP18 UTP20 UTP21 UTP22 UTP30 UTP4 UTP6 UTP7 UTP8 UTP9 YGR054W YGR102C YMR310C YOR059C YSH1 YTM1
View Details Ho Y, et al. (2002) CBF5 CBP2 CCM1 CDC33 CIC1 DBP7 DRS1 ENP2 ERB1 EST1 GBP2 HAS1 HMO1 HSH49 HTB1 HTB2 IMD1 IMD3 ISA1 KAP95 KRE33 KRI1 KRR1 MGM101 MNP1 MRM1 MSS116 NAF1 NOC2 NOP12 NOP2 NOP56 NOP58 NOP6 NOP7 NPL3 NUG1 PDC5 PDI1 PET127 PFK2 POL5 PRP43 PUF6 PWP1 RLI1 RPF2 RRP1 RRP12 RRP5 SHQ1 SRP1 TIF1, TIF2 TIF4631 TIF6 TRA1 TSR1 URB1 URB2 UTP10 UTP20 YER077C YPP1 YRA1 YTM1
View Details Qiu et al. (2008) CBF5 PXR1 RNT1 UTP13 UTP15

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run UTP23 No Comments Hazbun TR, et al. (2003)
View Run NAF1 No Comments Hazbun TR, et al. (2003)
View Run HSL7 No Comments McCusker D, et al (2007)
View Run TOR2 No Comments Reinke A, et al. (2004)
View Run NAF1 No Comments Hazbun TR, et al. (2003)
View Run DAD1 Dam1-765 complex purified from yeast with Dad1-TAP Shimogawa MM, et al. (2006)
View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
View Run RLF2 cac1: TAP-tagged Green EM, et al (2005)
View Run ZDS1 Sample 2- cpn2 from june 2005 McCusker D, et al (2007)
View Run ZDS1 Sample 3 - cpn + atp, from june 2005 McCusker D, et al (2007)
View Run BOI1 Sample bob1 (2nd set) from october 2005 McCusker D, et al (2007)
View Run MLP2 #19 Asynchronous Prep1-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)
View Run MLP2 #20 Asynchronous Prep1-TiO2 Phosphopeptide enrichment, PartB Keck JM, et al. (2011)
View Run MLP2 #32 Asynchronous Prep-No Phosphopeptide enrichment Keck JM, et al. (2011)
View Run MLP2 #19b Asynchronous Prep1-new search criteria Keck JM, et al. (2011)
View Run MLP2 #19a Asynchronous Prep1-new search criteria Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data CBF5 and NOP56 Huh WK, et al. (2003)
View Data CBF5 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..264] PSI-BLAST 219.69897 Pseudouridine synthase II TruB, C-terminal domain; Pseudouridine synthase II TruB
2 View Details [265..344] PSI-BLAST 219.69897 Pseudouridine synthase II TruB, C-terminal domain; Pseudouridine synthase II TruB
3 View Details [345..483] Pcons 1.56 Tropomyosin




Philius Transmembrane Prediction:

Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification: 0.93

Source: Reynolds et al. (2008)


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle