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Protein Overview: YPP1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run YPP1 No Comments Hazbun TR, et al. (2003)
View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen YPP1 YBR138C 2 Hazbun TR, et al. (2003)

Microscopy / Localization Data

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..179] PSI-BLAST 15.221849 Hop
2 View Details [180..257] deduced N/A No confident structure predictions are available.
3 View Details [258..403] PSI-BLAST 30.0 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor)
4 View Details [404..471] PSI-BLAST 30.0 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor)
5 View Details [472..608] PSI-BLAST 30.0 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor)
6 View Details [609..817] MSA 1.657995 View MSA. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • signal sequence binding
  • 2.68460419248567 bayes_pls_golite062009
  • binding
  • 2.29041171814244 bayes_pls_golite062009
  • protein binding
  • 1.6279032205159 bayes_pls_golite062009
  • transcription regulator activity
  • 1.36301889945421 bayes_pls_golite062009
  • nucleic acid binding
  • 1.04482640570705 bayes_pls_golite062009
  • DNA binding
  • 1.03582297487751 bayes_pls_golite062009
  • peroxisome targeting sequence binding
  • 1.01220052237687 bayes_pls_golite062009
  • ligase activity
  • 0.825764637499128 bayes_pls_golite062009
  • RNA binding
  • 0.540255067346835 bayes_pls_golite062009
  • transcription factor activity
  • 0.39224150319016 bayes_pls_golite062009
  • signal transducer activity
  • 0.279505673062022 bayes_pls_golite062009
  • molecular transducer activity
  • 0.279505673062022 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle