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Protein Overview: RAD34

General Information:
Name(s) found: RAD34 / YDR314C [SGD]
Description(s) found:
Found 26 descriptions.
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  • Protein involved in nucleotide excision repair (NER); homologous to RAD4 [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 692 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    Biological Process: nucleotide-excision repair [IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKRLLESSQ NDQANRKNSK IEKKEVSFYE EEETDDSFDS FYQDEEDDLS DIDWEEVSLD  60
   61 GSLTVTFGNI RRDREKVSKY KRKHNKKAFN YQRLKYGLHL IMIPFMLFLL KSRMKWIDDE 120
  121 RLNRRLRRSV PKLIGKKFKD WDVRDPAFKM DSLRTLLLGL VLWFRSNYKM NSNGIRQNFN 180
  181 RLQYLIKYAD NQNENSISES TYKKVLENQQ EFYGNRPLIN HGVEDIRKMA KRKMANRDIL 240
  241 TLFFFIILEN VLPGPKKLYL CFALPLHDYD IRCNKVKWQI EHGIGKVPNR FDSDLIQPYF 300
  301 WIELEVPTLS DGELYIIDPI AHLGEREMVL KTREDQFVPT YQPSVDMKYN LNQKFHYVVR 360
  361 INHAEKVLQD VSPRYVPNVC YRYFELSESS PILKSKHYTS YQYLSKWLKV LNKKKASVHH 420
  421 YAIMKKIALT NFTLPKSVTE IKRTDNFVIP SLLKSNEVLK ACAKQAATFT KGDNSQEPIF 480
  481 WRRDVIQLKS KQHWAILGRS ILPNAQPLKR KKYLPMRERM VRNLDKYVIK ELFSYEQTMK 540
  541 SPKYPSTYCD HLGQEHVITD LSHYKNKFGN IEIYSKETKP DGFELIPLSK EVDIKCLIKE 600
  601 YNKGKRKMQK IKYLDVVSGF DFKQKKGHAI PKIESILVKE TDYKAVQLLK QQTKVLLGLS 660
  661 FWDILLRKLR VNDRLNAEYG NVGNNEETLD DH

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) ARC15 ASR1 CAJ1 CDC7 CRN1 INP52 IRC22 MSK1 PNO1 PST2 RAD34 SAC6 SAR1 SLM1 TCP1 TED1 YPP1
    View Details Gavin AC, et al. (2006) CAM1 HSL1 RAD34 SRO7
    View Details Gavin AC, et al. (2002) DNA2 ECM29 KAP95 MEC1 MPH1 MRPS28 MSH2 MSH6 PGK1 RAD23 RAD34 RAD4 RAD52 RFA1 RFA2 RPN10 RPN12 RPN3 RPN6 RPN8 RPN9 RPT2 RPT3 RPT6 SRO7 SSL1 TFA1 TFB1 TFB4

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data RAD34 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..269] deduced N/A No confident structure predictions are available.
    2 View Details [270..692] Pfam 6.721246 DNA repair protein Rad4 No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.63

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle