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Protein Overview: RPN9

Protein Complex Data

  PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
View Details Riffle et al. (2010) (Unpublished Data) ECM29 GSG1 NAS6 OSH7 POL4 PRE5 RPN1 RPN10 RPN11 RPN12 RPN13 RPN2 RPN3 RPN5 RPN6 RPN7 RPN8 RPN9 RPT1 RPT2 RPT3 RPT4 RPT5 RPT6 SEC18 SEM1 SLX5 SPG5 SWA2 UBP6 URA3
View Details (MIPS) Mewes HW, et al. (2004) NAS6 RPN1 RPN10 RPN11 RPN12 RPN2 RPN3 RPN5 RPN6 RPN7 RPN8 RPN9 RPT1 RPT2 RPT3 RPT4 RPT5 RPT6
View Details Krogan NJ, et al. (2006) CSI1 CSN9 ERV46 FPR2 HUL5 IQG1 MOT1 MPT5 NAS6 NMD3 NPT1 PCI8 PEP1 PST1 PUS9 RPN1 RPN10 RPN11 RPN12 RPN13 RPN14 RPN2 RPN5 RPN6 RPN7 RPN8 RPN9 RPT1 RPT2 RPT3 RPT4 RPT5 RPT6 RRI1 RRI2 SEC18 SEM1 SKP1 SPG5 SPO77 SQT1 SWA2 TCB2 TIP41 TOD6 TOR2 TSR4 UBP6 YEN1 YKL027W YMR258C YNL022C YPR003C YPT52
View Details Gavin AC, et al. (2006) ECM29 RPN1 RPN10 RPN11 RPN12 RPN13 RPN5 RPN6 RPN7 RPN8 RPN9 RPT1
View Details Gavin AC, et al. (2002) ADA2 ADH1 ARO1 BDF2 BLM10 CCT8 CDC45 CDC55 CDC6 CKB1 CLU1 CPA2 DNA2 DYN1 ECM29 ECM5 ERG26 FUN19 GCN1 GCN20 GCN5 GFA1 GLT1 GLY1 GUS1 HAT1 HAT2 HEM13 HHF1, HHF2 HIF1 HSC82 HSM3 HSP42 ICL1 IDH2 ILV1 IML1 ISW1 KAP114 KAP123 KAP95 KRE33 LIP2 LYS12 MAC1 MCM2 MCM5 MCM6 MCM7 MDN1 MEC1 MED4 MES1 MIS1 MKT1 MLH2 MNN4 MOT1 MPH1 MRPS28 MSB1 MSH2 MSH6 MYO1 NAS6 NGG1 NIP1 NMD5 NOP1 ORC1 ORC2 ORC3 ORC4 ORC5 ORC6 PDC1 PFK1 PFK2 PGK1 PRE1 PRE10 PRE2 PRE3 PRE4 PRE5 PRE6 PRE7 PRE8 PRE9 PRO1 PRT1 PSD2 PSE1 PSH1 PSK1 PTC1 PUF6 PUP3 RAD23 RAD34 RAD4 RAD51 RAD52 RFA1 RFA2 RGR1 RPA135 RPB2 RPC40 RPD3 RPG1 RPN10 RPN11 RPN12 RPN13 RPN3 RPN5 RPN6 RPN7 RPN8 RPN9 RPO21 RPT1 RPT2 RPT3 RPT4 RPT5 RPT6 RSC3 RVB2 SAM1 SCL1 SGF29 SGF73 SIN3 SIN4 SPT15 SPT20 SPT7 SPT8 SRO7 SSL1 TAF1 TAF10 TAF11 TAF12 TAF13 TAF14 TAF2 TAF3 TAF4 TAF5 TAF6 TAF7 TAF8 TAF9 TBF1 TEF4 TEL1 TFA1 TFB1 TFB4 TFP1 TSC11 UBP6 USO1 UTP20 VAS1 VPS1 VTH2 YEF3 YFL006W YFR006W YHB1 YPR077C
View Details Ho Y, et al. (2002) ARP2 CPR6 CYS4 EMP24 HTB1 IDH2 KGD1 KRE6 LHS1 MDN1 MKT1 NAS6 RNQ1 RNR1 RNR3 RPN1 RPN10 RPN11 RPN12 RPN13 RPN14 RPN3 RPN5 RPN6 RPN7 RPN8 RPN9 RPT1 RPT2 RPT3 RPT4 RPT5 STI1 UBC12 YNL134C
View Details Qiu et al. (2008) ECM29 NAS6 PRE10 PRE6 RPN1 RPN10 RPN11 RPN12 RPN13 RPN2 RPN3 RPN5 RPN6 RPN7 RPN8 RPN9 RPT1 RPT2 RPT3 RPT4 RPT5 RPT6

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
View Run ZDS1 Sample 2- cpn2 from june 2005 McCusker D, et al (2007)
View Run ZDS1 Sample 3 - cpn + atp, from june 2005 McCusker D, et al (2007)
View Run BOI1 Sample boi 1 with ha tag from october 2005 McCusker D, et al (2007)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data RPN9 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..133] ORFEUS 9.88 Transcription factor MalT domain III
2 View Details [134..251] ORFEUS 9.88 Transcription factor MalT domain III
3 View Details [252..393] ORFEUS 9.88 Transcription factor MalT domain III




Philius Transmembrane Prediction:

Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification: 0.99

Source: Reynolds et al. (2008)


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle