General Information: |
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Name(s) found: |
TAF6 /
YGL112C
[SGD]
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Description(s) found:
Found 37 descriptions. SHOW ALL |
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Organism: | Saccharomyces cerevisiae |
Length: | 516 amino acids |
Gene Ontology: |
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Cellular Component: |
transcription factor TFIID complex
[IDA![]() ![]() SLIK (SAGA-like) complex [IPI ![]() SAGA complex [IDA ![]() |
Biological Process: |
chromatin modification
[TAS![]() protein amino acid acetylation [IPI ![]() histone acetylation [TAS ![]() chromatin organization [IPI ![]() regulation of transcription involved in G1 phase of mitotic cell cycle [IPI ![]() ![]() transcription initiation from RNA polymerase II promoter [TAS ![]() ![]() ![]() |
Molecular Function: |
general RNA polymerase II transcription factor activity
[TAS![]() |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MSTQQQSYTI WSPQDTVKDV AESLGLENIN DDVLKALAMD VEYRILEIIE QAVKFKRHSK 60 61 RDVLTTDDVS KALRVLNVEP LYGYYDGSEV NKAVSFSKVN TSGGQSVYYL DEEEVDFDRL 120 121 INEPLPQVPR LPTFTTHWLA VEGVQPAIIQ NPNLNDIRVS QPPFIRGAIV TALNDNSLQT 180 181 PVTSTTASAS VTDTGASQHL SNVKPGQNTE VKPLVKHVLS KELQIYFNKV ISTLTAKSQA 240 241 DEAAQHMKQA ALTSLRTDSG LHQLVPYFIQ FIAEQITQNL SDLQLLTTIL EMIYSLLSNT 300 301 SIFLDPYIHS LMPSILTLLL AKKLGGSPKD DSPQEIHEFL ERTNALRDFA ASLLDYVLKK 360 361 FPQAYKSLKP RVTRTLLKTF LDINRVFGTY YGCLKGVSVL EGESIRFFLG NLNNWARLVF 420 421 NESGITLDNI EEHLNDDSNP TRTKFTKEET QILVDTVISA LLVLKKDLPD LYEGKGEKVT 480 481 DEDKEKLLER CGVTIGFHIL KRDDAKELIS AIFFGE |
The following runs contain data for this protein:
  | BAIT | COMMENTS | PUBLICATION |
View Run | sample cbf3 from feb 2005 | Sandall S, et all (2006) | |
View Run | Sample 2- cpn2 from june 2005 | McCusker D, et al (2007) | |
View Run | Sample 3 - cpn + atp, from june 2005 | McCusker D, et al (2007) | |
View Run | Sample boi 1 with ha tag from october 2005 | McCusker D, et al (2007) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
New Feature: Upload Your Own Microscopy Data
  | PROTEIN(S) | PUBLICATION |
View Data |
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Huh WK, et al. (2003) |
Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..84] | ![]() |
79.221849 | TAF(II)62 |
2 | View Details | [85..194] | ![]() |
N/A | No confident structure predictions are available. |
3 | View Details | [195..306] [475..516] |
![]() |
7.22 | p120GAP domain |
4 | View Details | [307..474] | ![]() |
7.22 | p120GAP domain |
5 | View Details | [424..516] | ![]() |
N/A | Confident ab initio structure predictions are available. |
Functions predicted (by domain):
# | Gene Ontology predictions | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1 |
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2 | No functions predicted. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
3 | No functions predicted. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
4 | No functions predicted. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
5 | No functions predicted. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.96 |
Source: Reynolds et al. (2008)