| General Information: |
|
| Name(s) found: |
UBP8 /
YMR223W
[SGD]
|
| Description(s) found:
Found 24 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 471 amino acids |
Gene Ontology: |
|
| Cellular Component: |
SAGA complex
[IDA ]
|
| Biological Process: |
protein deubiquitination
[TAS]
|
| Molecular Function: |
ubiquitin-specific protease activity
[TAS]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MSICPHIQQV FQNEKSKDGV LKTCNAARYI LNHSVPKEKF LNTMKCGTCH EINSGATFMC 60
61 LQCGFCGCWN HSHFLSHSKQ IGHIFGINSN NGLLFCFKCE DYIGNIDLIN DAILAKYWDD 120
121 VCTKTMVPSM ERRDGLSGLI NMGSTCFMSS ILQCLIHNPY FIRHSMSQIH SNNCKVRSPD 180
181 KCFSCALDKI VHELYGALNT KQASSSSTST NRQTGFIYLL TCAWKINQNL AGYSQQDAHE 240
241 FWQFIINQIH QSYVLDLPNA KEVSRANNKQ CECIVHTVFE GSLESSIVCP GCQNNSKTTI 300
301 DPFLDLSLDI KDKKKLYECL DSFHKKEQLK DFNYHCGECN STQDAIKQLG IHKLPSVLVL 360
361 QLKRFEHLLN GSNRKLDDFI EFPTYLNMKN YCSTKEKDKH SENGKVPDII YELIGIVSHK 420
421 GTVNEGHYIA FCKISGGQWF KFNDSMVSSI SQEEVLKEQA YLLFYTIRQV N |
| PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS | |
| View Details | Riffle et al. (2010) (Unpublished Data) |
|
ADA2 GCN5 HFI1 NGG1 SGF29 SGF73 SPT20 SPT3 SPT7 SPT8 TAF10 TAF5 TAF6 UBP8 |
| View Details | Krogan NJ, et al. (2006) |
|
ADA2 AHC1 AHC2 FMP40 GCN5 HFI1 MSS4 NGG1 PDR15 RAD59 REV3 SGF11 SGF29 SGF73 SNL1 SPT20 SPT3 SPT7 SPT8 TAF1 TAF10 TAF11 TAF12 TAF13 TAF3 TAF4 TAF5 TAF6 TAF7 TAF9 UBP8 YMR007W |
| View Details | Gavin AC, et al. (2002) |
|
ADA2 GCN5 HEM13 HFI1 MES1 MYO4 NGG1 PSK1 PTC1 RPB2 RPO21 SGF29 SGF73 SPT20 SPT7 SPT8 TAF1 TAF10 TAF11 TAF12 TAF3 TAF5 TAF6 TAF7 TAF9 UBP8 VAS1 |
| View Details | Ho Y, et al. (2002) |
|
ADA2 FET4 GCN5 HFI1 SGF29 SIR3 SPT7 TAF6 TFP1 TRA1 UBP8 |
| View Details | Qiu et al. (2008) |
|
ADA2 GCN5 HFI1 NGG1 NUT2 SGF11 SGF29 SGF73 SPT20 SPT7 TAF10 TAF14 TAF3 TAF9 UBP8 |
The following runs contain data for this protein:
| BAIT | COMMENTS | PUBLICATION | |
| View Run | sample cbf3 from feb 2005 | Sandall S, et all (2006) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
| BAIT | PREY | HITS | PUBLICATION | |
| View Screen | 2 | Uetz P, et al. (2000) |
New Feature: Upload Your Own Microscopy Data
| PROTEIN(S) | PUBLICATION | |
| View Data |
|
Huh WK, et al. (2003) |
Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..130] |  |
21.638272 | Zn-finger in ubiquitin-hydrolases and other protein No confident structure predictions are available. |
| 2 | View Details | [131..179] | |
12.19382 | No description for PF00442 was found. No confident structure predictions are available. |
| 3 | View Details | [180..398] | |
4.226988 | View MSA. No confident structure predictions are available. |
| 4 | View Details | [399..471] | |
27.619789 | Ubiquitin carboxyl-terminal hydrolase No confident structure predictions are available. |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.51 |
Source: Reynolds et al. (2008)