General Information: |
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Name(s) found: |
VPS1 /
YKR001C
[SGD]
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Description(s) found:
Found 27 descriptions. SHOW ALL |
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Organism: | Saccharomyces cerevisiae |
Length: | 704 amino acids |
Gene Ontology: |
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Cellular Component: |
membrane fraction
[IDA]
peroxisome [IDA] cytoplasm [IDA] mitochondrial outer membrane [IDA] |
Biological Process: |
protein retention in Golgi apparatus
[IMP]
peroxisome organization [IDA][IGI][IMP] vacuolar transport [IMP] protein targeting to vacuole [IMP] actin cytoskeleton organization [IGI][IMP][IPI] |
Molecular Function: |
GTPase activity
[IDA][ISS]
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Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MDEHLISTIN KLQDALAPLG GGSQSPIDLP QITVVGSQSS GKSSVLENIV GRDFLPRGTG 60 61 IVTRRPLVLQ LINRRPKKSE HAKVNQTANE LIDLNINDDD KKKDESGKHQ NEGQSEDNKE 120 121 EWGEFLHLPG KKFYNFDEIR KEIVKETDKV TGANSGISSV PINLRIYSPH VLTLTLVDLP 180 181 GLTKVPVGDQ PPDIERQIKD MLLKYISKPN AIILSVNAAN TDLANSDGLK LAREVDPEGT 240 241 RTIGVLTKVD LMDQGTDVID ILAGRVIPLR YGYIPVINRG QKDIEHKKTI REALENERKF 300 301 FENHPSYSSK AHYCGTPYLA KKLNSILLHH IRQTLPEIKA KIEATLKKYQ NELINLGPET 360 361 MDSASSVVLS MITDFSNEYA GILDGEAKEL SSQELSGGAR ISYVFHETFK NGVDSLDPFD 420 421 QIKDSDIRTI MYNSSGSAPS LFVGTEAFEV LVKQQIRRFE EPSLRLVTLV FDELVRMLKQ 480 481 IISQPKYSRY PALREAISNQ FIQFLKDATI PTNEFVVDII KAEQTYINTA HPDLLKGSQA 540 541 MVMVEEKLHP RQVAVDPKTG KPLPTQPSSS KAPVMEEKSG FFGGFFSTKN KKKLAALESP 600 601 PPVLKATGQM TERETMETEV IKLLISSYFS IVKRTIADII PKALMLKLIV KSKTDIQKVL 660 661 LEKLYGKQDI EELTKENDIT IQRRKECKKM VEILRNASQI VSSV |
The following runs contain data for this protein:
  | BAIT | COMMENTS | PUBLICATION |
View Run | No Comments | Reinke A, et al. (2004) | |
View Run | No Comments | Toshima J, et al (2006) | |
View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
View Run | Sample 2- cpn2 from june 2005 | McCusker D, et al (2007) | |
View Run | Sample 3 - cpn + atp, from june 2005 | McCusker D, et al (2007) | |
View Run | Sample boi 1 with ha tag from october 2005 | McCusker D, et al (2007) | |
View Run | Sample boi1 with gst from october 2005 | McCusker D, et al (2007) | |
View Run | #12 Mitotic Prep1-TiO2 Flowthrough | Keck JM, et al. (2011) | |
View Run | #11 Mitotic Prep1-TiO2 enriched, new search criteria | Keck JM, et al. (2011) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
New Feature: Upload Your Own Microscopy Data
  | PROTEIN(S) | PUBLICATION |
View Data |
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Huh WK, et al. (2003) |
View Data |
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Huh WK, et al. (2003) |
Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..356] | 1185.0 | Dynamin G domain | |
2 | View Details | [357..583] | 42.69897 | Dynamin central region No confident structure predictions are available. | |
3 | View Details | [584..704] | 40.173925 | Dynamin GTPase effector domain No confident structure predictions are available. | |
4 | View Details | [600..704] | 40.187087 | No description for PF02212.9 was found. Confident ab initio structure predictions are available. |
Functions predicted (by domain):
# | Gene Ontology predictions | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1 |
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2 | No functions predicted. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
3 | No functions predicted. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
4 | No functions predicted. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)