General Information: |
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Name(s) found: |
TBF1 /
YPL128C
[SGD]
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Description(s) found:
Found 23 descriptions. SHOW ALL |
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Organism: | Saccharomyces cerevisiae |
Length: | 562 amino acids |
Gene Ontology: |
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Cellular Component: |
nucleus
[IDA![]() nuclear chromosome [IPI ![]() nuclear chromosome, telomeric region [TAS ![]() |
Biological Process: |
loss of chromatin silencing
[IDA![]() |
Molecular Function: |
DNA binding
[IPI![]() transcription factor activity [TAS ![]() chromatin insulator sequence binding [IDA ![]() |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MDSQVPNNNE SLNRFNDIIQ SLPARTRLTI CSLCLLDNIS TQLLRFLILN ANSPNIIAVL 60 61 TDQTAFLSSG ETEIFQTLVK LFKQIRMIYH TRSPLLSVHD VAPGLWFPNS PPPLILRGHE 120 121 AFIITAIRKA NLLTFLLTSL NCLNYGFELL QSIFLDIFCP NTNTVGNNSL EQSGKFLKSQ 180 181 AILYLDLKTQ AYIAGLKEFQ DETNEISLEK KQELLDLIFP SNLADILVQR RTGDSGDITL 240 241 LTPSEKDFVE RCDRRRENLK IVQDFNSLTQ SYEWAQFIRE LLDYCNKNMG LIIWGRKGRG 300 301 KSPLYDFDVN EFDPQVLFST GTRTVEFMDD QNQPSSASAF LSTARPNHYS THTPTTDVSS 360 361 KNPAITQSIV DAAVAASMSN SSSGPHSSHN NSSNSNNNGS IGLRKPKAKR TWSKEEEEAL 420 421 VEGLKEVGPS WSKILDLYGP GGKITENLKN RTQVQLKDKA RNWKLQYLKS GKPLPDYLIK 480 481 VTGNLEKIYK AKKKFSQSPN SSTIMEQNLS QHPSSAASAT EDTQTHQEDS HGQNSDNMPS 540 541 NGLFGNSTSD NTGFDPHLED GM |
  | PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS |
View Details | Riffle et al. (2010) (Unpublished Data) |
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TBF1 VID22 YGR071C |
View Details | Krogan NJ, et al. (2006) |
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TBF1 VID22 YGR071C |
View Details | Gavin AC, et al. (2006) |
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TBF1 TOR1 VID22 |
View Details | Gavin AC, et al. (2002) |
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ADA2 ADH1 CLU1 FUN19 GCN5 HEM13 KAP114 KAP123 MED4 MES1 MNN4 MOT1 MYO1 NGG1 NOP1 PFK2 PSK1 PTC1 PUF6 RPB2 RPN9 RPO21 RPT5 RVB2 SGF29 SGF73 SIN3 SIN4 SPT15 SPT20 SPT7 SPT8 TAF1 TAF10 TAF11 TAF12 TAF13 TAF14 TAF2 TAF3 TAF4 TAF5 TAF6 TAF7 TAF8 TAF9 TBF1 TEF4 VAS1 VPS1 |
View Details | Ho Y, et al. (2002) |
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ASF1 CDC13 EDE1 KAP95 PTC2 RAD53 SRP1 SWI4 TBF1 UTP22 YTA7 |
View Details | Qiu et al. (2008) |
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ABF1 ARP4 CDC13 GON7 KAE1 MCM6 NHP6A PCC1 POB3 RAP1 RIF1 SAS5 SIR3 SIR4 SLD3 SMC4 SPT4 SUB2 TBF1 YKU80 |
The following runs contain data for this protein:
  | BAIT | COMMENTS | PUBLICATION |
View Run | sample cbf3 from feb 2005 | Sandall S, et all (2006) | |
View Run | Sample 2- cpn2 from june 2005 | McCusker D, et al (2007) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
New Feature: Upload Your Own Microscopy Data
  | PROTEIN(S) | PUBLICATION |
View Data |
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Huh WK, et al. (2003) |
View Data |
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Huh WK, et al. (2003) |
Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..112] | ![]() |
N/A | Confident ab initio structure predictions are available. |
2 | View Details | [113..384] | ![]() |
1.004923 | View MSA. No confident structure predictions are available. |
3 | View Details | [385..497] | ![]() |
10.920819 | Myb-like DNA-binding domain No confident structure predictions are available. |
4 | View Details | [498..562] | ![]() |
N/A | Confident ab initio structure predictions are available. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.85 |
Source: Reynolds et al. (2008)