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Protein Overview: PCC1

General Information:
Name(s) found: PCC1 / YKR095W-A [SGD]
Description(s) found:
Found 19 descriptions.
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  • Proposed transcription factor involved in the expression of genes regulated by alpha-factor and galactose; component of the EKC/KEOPS protein complex with Kae1p, Gon7p, Bud32p, and Cgi121p; related to human cancer-testis antigens [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 88 amino acids

    Gene Ontology:
    Cellular Component: nuclear chromatin [IDALink to PubMed article]
    EKC/KEOPS protein complex [IDALink to PubMed article]
    Biological Process: positive regulation of transcription from RNA polymerase II promoter by pheromones [IMPLink to PubMed article]
    mating projection assembly [IMPLink to PubMed article]
    positive regulation of transcription from RNA polymerase II promoter [IMPLink to PubMed article]
    Molecular Function: chromatin DNA binding [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSKREKSLD HTLELKIPFE TERQATIATK VLSPDPILKP QDFQVDYSSE KNVMLVQFRS  60
   61 IDDRVLRVGV SSIIDSIKTI VEAMDVLS

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Qiu et al. (2008) ABF1 ARP4 BUD32 CGI121 DAD3 DAD4 FPR4 GON7 HHF1, HHF2 HHO1 HSK3 HTA1 HTA2 HTB1 HTB2 HTZ1 KAE1 MCM1 MCM3 MCM5 MCM6 NHP6A ORC4 PCC1 POB3 RAD18 RAD5 RAP1 RED1 RFA1 SAS4 SIR3 SIR4 SLD3 STM1 TBF1 YBR090C-A, NHP6B YKU70 YKU80

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..88] Pfam 35.769551 No description for PF09341.1 was found. Confident ab initio structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle