General Information: |
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Name(s) found: |
SIR4 /
YDR227W
[SGD]
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Description(s) found:
Found 28 descriptions. SHOW ALL |
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Organism: | Saccharomyces cerevisiae |
Length: | 1358 amino acids |
Gene Ontology: |
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Cellular Component: |
nuclear telomeric heterochromatin
[IDA![]() chromatin silencing complex [IDA ![]() nuclear telomere cap complex [IDA ![]() |
Biological Process: |
loss of chromatin silencing involved in replicative cell aging
[IDA![]() telomere maintenance [IMP ![]() chromatin silencing [TAS ![]() double-strand break repair via nonhomologous end joining [IDA ![]() |
Molecular Function: |
structural constituent of chromatin
[TAS![]() histone binding [TAS ![]() |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MPNDNKTPNR SSTPKFTKKP VTPNDKIPER EEKSNEVKTP KIPLFTFAKS KNYSRPSTAI 60 61 HTSPHQPSDV KPTSHKQLQQ PKSSPLKKNN YNSFPHSNLE KISNSKLLSL LRSKTSAGRI 120 121 ESNNPSHDAS RSLASFEQTA FSRHAQQQTS TFNSKPVRTI VPISTSQTNN SFLSGVKSLL 180 181 SEEKIRDYSK EILGINLANE QPVLEKPLKK GSADIGASVI SLTKDKSIRK DTVEEKKEEK 240 241 LNIGKNFAHS DSLSVPKVSA GDSGISPEES KARSPGIAKP NAIQTEVYGI NEESTNERLE 300 301 INQEKPVKLD ENSANSTVAS ALDTNGTSAT TETLTSKKIV PSPKKVAIDQ DKITLHDEKT 360 361 LAPSKHQPIT SEQKMKEDAD LKRMEILKSP HLSKSPADRP QGRRNSRNFS TRDEETTKLA 420 421 FLVEYEGQEN NYNSTSRSTE KKNDMNTSAK NKNGENKKIG KRPPEIMSTE AHVNKVTEET 480 481 TKQIQSVRID GRKVLQKVQG ESHIDSRNNT LNVTPSKRPQ LGEIPNPMKK HKPNEGRTPN 540 541 ISNGTINIQK KLEPKEIVRD ILHTKESSNE AKKTIQNPLN KSQNTALPST HKVTQKKDIK 600 601 IGTNDLFQVE SAPKISSEID RENVKSKDEP VSKAVESKSL LNLFSNVLKA PFIKSESKPF 660 661 SSDALSKEKA NFLETIASTE KPENKTDKVS LSQPVSASKH EYSDNFPVSL SQPSKKSFAN 720 721 HTEDEQIEKK KICRGRMNTI ITHPGKMELV YVSDSDDSSS DNDSLTDLES LSSGESNEIK 780 781 VTNDLDTSAE KDQIQAGKWF DPVLDWRKSD RELTKNILWR IADKTTYDKE TITDLIEQGI 840 841 PKHSYLSGNP LTSVTNDICS VENYETSSAF FYQQVHKKDR LQYLPLYAVS TFENTNNTEK 900 901 NDVTNKNINI GKHSQEQNSS SAKPSQIPTV SSPLGFEETK LSTTPTKSNR RVSHSDTNSS 960 961 KPKNTKENLS KSSWRQEWLA NLKLISVSLV DEFPSELSDS DRQIINEKMQ LLKDIFANNL1020 1021 KSAISNNFRE SDIIILKGEI EDYPMSSEIK IYYNELQNKP DAKKARFWSF MKTQRFVSNM1080 1081 GFDIQKSCEP VSISTSVKPH VVEPEHMADA KIMPKDILQI TKKPLMVKNV KPSSPPDVKS1140 1141 LVQLSTMETK TLPEKKQFDS IFNSNKAKII PGNGKHASEN ISLSFSRPAS YGYFSVGKRV1200 1201 PIVEDRRVKQ LDDITDSNTT EILTSVDVLG THSQTGTQQS NMYTSTQKTE LEIDNKDSVT1260 1261 ECSKDMKEDG LSFVDIVLSK AASALDEKEK QLAVANEIIR SLSDEVMRNE IRITSLQGDL1320 1321 TFTKKCLENA RSQISEKDAK INKLMEKDFQ VNKEIKPY |
  | PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS |
View Details | Riffle et al. (2010) (Unpublished Data) |
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GDH2 NET1 SIR2 SIR4 |
View Details | Krogan NJ, et al. (2006) |
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GPG1 SIR2 SIR3 SIR4 YLR278C |
View Details | Gavin AC, et al. (2002) |
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ADH1 BGL2 CDC14 HSP42 NET1 SIR2 SIR4 TDH3 YEF3 |
View Details | Ho Y, et al. (2002) |
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BLM10 SEC53 SIR2 SIR3 SIR4 SRP1 YFL006W |
View Details | Qiu et al. (2008) |
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FPR4 NET1 PCC1 RAP1 RIF1 SIR3 SIR4 SUB2 TBF1 |
The following runs contain data for this protein:
  | BAIT | COMMENTS | PUBLICATION |
View Run | 3829 - low filter | Green EM, et al (2005) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
New Feature: Upload Your Own Microscopy Data
  | PROTEIN(S) | PUBLICATION |
View Data |
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Huh WK, et al. (2003) |
View Data |
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Huh WK, et al. (2003) |
Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..123] | ![]() |
1.002954 | View MSA. No confident structure predictions are available. |
2 | View Details | [124..1358] | ![]() |
N/A | No confident structure predictions are available. |
3 | View Details | [277..390] | ![]() |
N/A | No confident structure predictions are available. |
4 | View Details | [391..444] | ![]() |
N/A | No confident structure predictions are available. |
5 | View Details | [445..659] | ![]() |
N/A | No confident structure predictions are available. |
6 | View Details | [660..784] | ![]() |
N/A | No confident structure predictions are available. |
7 | View Details | [785..924] | ![]() |
N/A | No confident structure predictions are available. |
8 | View Details | [925..1081] | ![]() |
N/A | No confident structure predictions are available. |
9 | View Details | [1082..1201] | ![]() |
N/A | No confident structure predictions are available. |
10 | View Details | [1202..1358] | ![]() |
78.69897 | Dimerization motif of sir4 |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)