General Information: |
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Name(s) found: |
GDH2 /
YDL215C
[SGD]
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Description(s) found:
Found 27 descriptions. SHOW ALL |
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Organism: | Saccharomyces cerevisiae |
Length: | 1092 amino acids |
Gene Ontology: |
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Cellular Component: |
soluble fraction
[IDA]
mitochondrion [IDA] |
Biological Process: |
nitrogen compound metabolic process
[IMP]
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Molecular Function: |
glutamate dehydrogenase activity
[IMP][ISS]
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Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MLFDNKNRGA LNSLNTPDIA SLSISSMSDY HVFDFPGKDL QREEVIDLLD QQGFIPDDLI 60 61 EQEVDWFYNS LGIDDLFFSR ESPQLISNII HSLYASKLDF FAKSKFNGIQ PRLFSIKNKI 120 121 ITNDNHAIFM ESNTGVSISD SQQKNFKFAS DAVGNDTLEH GKDTIKKNRI EMDDSCPPYE 180 181 LDSEIDDLFL DNKSQKNCRL VSFWAPESEL KLTFVYESVY PNDDPAGVDI SSQDLLKGDI 240 241 ESISDKTMYK VSSNENKKLY GLLLKLVKER EGPVIKTTRS VENKDEIRLL VAYKRFTTKR 300 301 YYSALNSLFH YYKLKPSKFY LESFNVKDDD IIIFSVYLNE NQQLEDVLLH DVEAALKQVE 360 361 REASLLYAIP NNSFHEVYQR RQFSPKEAIY AHIGAIFINH FVNRLGSDYQ NLLSQITIKR 420 421 NDTTLLEIVE NLKRKLRNET LTQQTIINIM SKHYTIISKL YKNFAQIHYY HNSTKDMEKT 480 481 LSFQRLEKVE PFKNDQEFEA YLNKFIPNDS PDLLILKTLN IFNKSILKTN FFITRKVAIS 540 541 FRLDPSLVMT KFEYPETPYG IFFVVGNTFK GFHIRFRDIA RGGIRIVCSR NQDIYDLNSK 600 601 NVIDENYQLA STQQRKNKDI PEGGSKGVIL LNPGLVEHDQ TFVAFSQYVD AMIDILINDP 660 661 LKENYVNLLP KEEILFFGPD EGTAGFVDWA TNHARVRNCP WWKSFLTGKS PSLGGIPHDE 720 721 YGMTSLGVRA YVNKIYETLN LTNSTVYKFQ TGGPDGDLGS NEILLSSPNE CYLAILDGSG 780 781 VLCDPKGLDK DELCRLAHER KMISDFDTSK LSNNGFFVSV DAMDIMLPNG TIVANGTTFR 840 841 NTFHTQIFKF VDHVDIFVPC GGRPNSITLN NLHYFVDEKT GKCKIPYIVE GANLFITQPA 900 901 KNALEEHGCI LFKDASANKG GVTSSSMEVL ASLALNDNDF VHKFIGDVSG ERSALYKSYV 960 961 VEVQSRIQKN AELEFGQLWN LNQLNGTHIS EISNQLSFTI NKLNDDLVAS QELWLNDLKL1020 1021 RNYLLLDKII PKILIDVAGP QSVLENIPES YLKVLLSSYL SSTFVYQNGI DVNIGKFLEF1080 1081 IGGLKREAEA SA |
  | PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS |
View Details | Riffle et al. (2010) (Unpublished Data) | GDH2 NDE2 PGA2 PSA1 REV1 RFX1 SAK1 SIR4 STP4 SYP1 TMN2 YMR160W YNR062C | |
View Details | Krogan NJ, et al. (2006) | GDH2 MMS21 NSE3 NSE4 SMC5 YOR352W | |
View Details | Ho Y, et al. (2002) | GDH2 MMS22 RTT101 RTT107 |
The following runs contain data for this protein:
  | BAIT | COMMENTS | PUBLICATION |
View Run | sample cbf3 from feb 2005 | Sandall S, et all (2006) | |
View Run | Sample 2- cpn2 from june 2005 | McCusker D, et al (2007) | |
View Run | Sample 3 - cpn + atp, from june 2005 | McCusker D, et al (2007) | |
View Run | #31 Asynchronous Prep (Protease cleavage) | Keck JM, et al. (2011) | |
View Run | #03 Alpha Factor Prep1-TiO2 Flowthrough | Keck JM, et al. (2011) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
New Feature: Upload Your Own Microscopy Data
  | PROTEIN(S) | PUBLICATION |
View Data |
|
Huh WK, et al. (2003) |
Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..377] | 1.016878 | View MSA. No confident structure predictions are available. | |
2 | View Details | [378..471] | N/A | No confident structure predictions are available. | |
3 | View Details | [472..719] [921..940] [971..1015] |
117.0 | Glutamate dehydrogenase | |
4 | View Details | [720..920] [941..970] |
117.0 | Glutamate dehydrogenase | |
5 | View Details | [1016..1092] | N/A | No confident structure predictions are available. |
Functions predicted (by domain):
# | Gene Ontology predictions | ||||||||||||||||||||||||||||||
1 | No functions predicted. | ||||||||||||||||||||||||||||||
2 | No functions predicted. | ||||||||||||||||||||||||||||||
3 | No functions predicted. | ||||||||||||||||||||||||||||||
4 |
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5 | No functions predicted. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.98 |
Source: Reynolds et al. (2008)