General Information: |
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Name(s) found: |
RFA1 /
YAR007C
[SGD]
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Description(s) found:
Found 33 descriptions. SHOW ALL |
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Organism: | Saccharomyces cerevisiae |
Length: | 621 amino acids |
Gene Ontology: |
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Cellular Component: |
chromosome, telomeric region
[IMP![]() nucleus [IDA ![]() cytoplasm [IDA ![]() DNA replication factor A complex [TAS ![]() |
Biological Process: |
DNA strand elongation involved in DNA replication
[TAS![]() double-strand break repair via homologous recombination [IGI ![]() DNA recombination [TAS ![]() nucleotide-excision repair [TAS ![]() telomere maintenance via recombination [IGI ![]() DNA unwinding involved in replication [TAS ![]() postreplication repair [TAS ![]() DNA replication, synthesis of RNA primer [TAS ![]() |
Molecular Function: |
damaged DNA binding
[TAS![]() single-stranded DNA binding [TAS ![]() |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MSSVQLSRGD FHSIFTNKQR YDNPTGGVYQ VYNTRKSDGA NSNRKNLIMI SDGIYHMKAL 60 61 LRNQAASKFQ SMELQRGDII RVIIAEPAIV RERKKYVLLV DDFELVQSRA DMVNQTSTFL 120 121 DNYFSEHPNE TLKDEDITDS GNVANQTNAS NAGVPDMLHS NSNLNANERK FANENPNSQK 180 181 TRPIFAIEQL SPYQNVWTIK ARVSYKGEIK TWHNQRGDGK LFNVNFLDTS GEIRATAFND 240 241 FATKFNEILQ EGKVYYVSKA KLQPAKPQFT NLTHPYELNL DRDTVIEECF DESNVPKTHF 300 301 NFIKLDAIQN QEVNSNVDVL GIIQTINPHF ELTSRAGKKF DRRDITIVDD SGFSISVGLW 360 361 NQQALDFNLP EGSVAAIKGV RVTDFGGKSL SMGFSSTLIP NPEIPEAYAL KGWYDSKGRN 420 421 ANFITLKQEP GMGGQSAASL TKFIAQRITI ARAQAENLGR SEKGDFFSVK AAISFLKVDN 480 481 FAYPACSNEN CNKKVLEQPD GTWRCEKCDT NNARPNWRYI LTISIIDETN QLWLTLFDDQ 540 541 AKQLLGVDAN TLMSLKEEDP NEFTKITQSI QMNEYDFRIR AREDTYNDQS RIRYTVANLH 600 601 SLNYRAEADY LADELSKALL A |
The following runs contain data for this protein:
  | BAIT | COMMENTS | PUBLICATION |
View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
View Run | Sample boi1 with gst from october 2005 | McCusker D, et al (2007) | |
View Run | Sample bob1 (2nd set) from october 2005 | McCusker D, et al (2007) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
New Feature: Upload Your Own Microscopy Data
  | PROTEIN(S) | PUBLICATION |
View Data |
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Sundin BA, et al. (2004) |
View Data |
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Sundin BA, et al. (2004) |
View Data |
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Sundin BA, et al. (2004) |
View Data |
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Huh WK, et al. (2003) |
Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..116] | ![]() |
32.39794 | Replication protein A 70 KDa subunit (RPA70) |
2 | View Details | [117..176] | ![]() |
N/A | No confident structure predictions are available. |
3 | View Details | [177..299] | ![]() |
604.927757 | Replication protein A 70 KDa subunit (RPA70) |
4 | View Details | [300..440] | ![]() |
604.927757 | Replication protein A 70 KDa subunit (RPA70) |
5 | View Details | [441..621] | ![]() |
355.39794 | Replication protein A 70 KDa subunit (RPA70) |
Functions predicted (by domain):
# | Gene Ontology predictions | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1 |
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2 |
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3 |
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4 | No functions predicted. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
5 | No functions predicted. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)