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Protein Overview: ECM29

Protein Complex Data

  PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
View Details Riffle et al. (2010) (Unpublished Data) CLU1 ECM29 NAS6 PRE5 RPN1 RPN10 RPN11 RPN12 RPN13 RPN2 RPN3 RPN5 RPN6 RPN7 RPN8 RPN9 RPT1 RPT2 RPT3 RPT4 RPT5 RPT6 UBP6
View Details Krogan NJ, et al. (2006) ADE2 BSC2 CWH41 DBF4 DIG1 ECM29 HAL5 LAA1 MRC1 OPI9 PEX32 PRP5 PTH2 RGA2 RMA1 RPN3 SIR1 STE12 THR1 TLG2 VPS45 YDL199C YEL057C YPL035C
View Details Gavin AC, et al. (2006) ECM29 RPN1 RPN10 RPN11 RPN12 RPN13 RPN5 RPN6 RPN7 RPN8 RPN9 RPT1
View Details Gavin AC, et al. (2002) ADE4 ADH1 ASC1 BFR2 BLM10 BMH1 BMH2 BMS1 BRX1 BUD21 CBF5 CCT4 CDC6 CFT2 CKA1 CKA2 CKB1 CKB2 CLU1 CMS1 CRM1 CRN1 CSE1 DAM1 DBP8 DBP9 DHH1 DIA4 DIM1 DIP2 DIS3 DNA2 DUG1 ECM16 ECM29 EMG1 ENP1 ENP2 ERO1 ESF1 ESF2 EST3 FAP7 FIP1 FKS1 GCN1 GCN20 GEA2 GFA1 GLC7 HAS1 HCA4 HHF1, HHF2 HRP1 HSL1 HTA2 IDH2 IMP3 IMP4 INO4 KAP104 KAP123 KAP95 KRE33 KRR1 KTR3 LCB1 LCB2 LCP5 LTV1 LYS12 MDS3 MEC1 MET18 MIP6 MIR1 MIS1 MLH2 MPH1 MPP10 MRD1 MRPL23 MRPS28 MSH2 MSH6 MVD1 NAB2 NAB3 NAB6 NAN1 NAS6 NOB1 NOC2 NOC4 NOP1 NOP12 NOP14 NOP56 NOP58 NOP6 NRD1 NUD1 PAP1 PDA1 PDB1 PFS2 PGK1 PNO1 PRE1 PRE10 PRE2 PRE3 PRE4 PRE5 PRE6 PRE7 PRE8 PRE9 PRP43 PSE1 PTA1 PTI1 PUP3 PWP2 RAD23 RAD3 RAD34 RAD4 RAD52 RCL1 REF2 RFA1 RFA2 RGR1 RML2 RNA14 ROK1 ROM2 RPA135 RPN10 RPN11 RPN12 RPN13 RPN3 RPN5 RPN6 RPN7 RPN8 RPN9 RPP2B RPT1 RPT2 RPT3 RPT4 RPT5 RPT6 RRP12 RRP7 RRP9 RTG2 SAM1 SAM2 SCL1 SEC21 SEC7 SEN54 SLC1 SLX9 SOF1 SPA2 SRO7 SRO9 SRP1 SRV2 SSL1 SUI3 SUP35 SUP45 TAO3 TFA1 TFB1 TFB4 TFP1 TIF1, TIF2 TSR1 TUB3 UBP6 ULP1 USO1 UTP10 UTP11 UTP13 UTP15 UTP18 UTP20 UTP21 UTP22 UTP30 UTP4 UTP6 UTP7 UTP8 UTP9 VAC14 VPS5 YDJ1 YFL006W YHR020W YJL017W YMR310C YOR059C YRA1 YSH1
View Details Ho Y, et al. (2002) ADR1 BBC1 CDC39 CDC53 COP1 CRM1 DOP1 DUR1,2 ECM29 ECM33 FAA4 GAL3 GCN1 GYP5 HOM6 HRT1 HYP2 KAP122 MDN1 MET18 MKT1 MMS1 MYO2 PAA1 PFK1 PHO84 PMA2 PTC3 REP1 RPA135 RPA190 RPC40 RPN1 RPO31 RVS167 SRY1 TCB1 TDA10 TPS1 UBI4 UBP7 VPS13 YAR009C YER138C YGP1 YLR035C-A
View Details Qiu et al. (2008) ECM29 RPN9

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run TID3 No Comments Cheeseman IM, et al. (2002)
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run RLF2 phosphorylation data - cascade search Green EM, et al (2005)
View Run ZDS1 Sample 2- cpn2 from june 2005 McCusker D, et al (2007)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data ECM29 Huh WK, et al. (2003)

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..151] MSA 1.005972 View MSA. No confident structure predictions are available.
2 View Details [152..525] deduced N/A No confident structure predictions are available.
3 View Details [526..878] MSA 3.083968 View MSA. No confident structure predictions are available.
4 View Details [879..1022] PSI-BLAST 46.0 Importin beta
5 View Details [1023..1153] deduced N/A No confident structure predictions are available.
6 View Details [1154..1629] MSA 19.377997 View MSA. No confident structure predictions are available.
7 View Details [1630..1868] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • hydrolase activity
  • 2.62777210765927 bayes_pls_golite062009
  • binding
  • 2.26699794423696 bayes_pls_golite062009
  • nucleic acid binding
  • 0.954891553462304 bayes_pls_golite062009
  • protein binding
  • 0.867374463164997 bayes_pls_golite062009
  • DNA binding
  • 0.0652553830451623 bayes_pls_golite062009
    2
    Term Confidence Notes
  • hydrolase activity
  • 2.5894939457048 bayes_pls_golite062009
  • binding
  • 2.37294644142029 bayes_pls_golite062009
  • nucleic acid binding
  • 1.00618489031368 bayes_pls_golite062009
  • protein binding
  • 0.992946510849437 bayes_pls_golite062009
  • DNA binding
  • 0.0559585284546991 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.
    7 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.79

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle