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Protein Overview: CDC53

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run MLP2 #33 Asynchronous SPB prep Keck JM, et al. (2011)
View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data CDC53 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..95]
[122..155]
PSI-BLAST 2110.0 Anaphase promoting complex (APC); Cullin homolog 1, Cul-1; Cullin homolog 1, cul-1
2 View Details [96..121]
[156..297]
[311..324]
PSI-BLAST 2110.0 Anaphase promoting complex (APC); Cullin homolog 1, Cul-1; Cullin homolog 1, cul-1
3 View Details [298..310]
[325..526]
PSI-BLAST 2110.0 Anaphase promoting complex (APC); Cullin homolog 1, Cul-1; Cullin homolog 1, cul-1
4 View Details [527..602] PSI-BLAST 2110.0 Anaphase promoting complex (APC); Cullin homolog 1, Cul-1; Cullin homolog 1, cul-1
5 View Details [603..742] PSI-BLAST 2110.0 Anaphase promoting complex (APC); Cullin homolog 1, Cul-1; Cullin homolog 1, cul-1
6 View Details [743..815] PSI-BLAST 2110.0 Anaphase promoting complex (APC); Cullin homolog 1, Cul-1; Cullin homolog 1, cul-1

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • ubiquitin-protein ligase activity
  • 9.95820721075934 bayes_pls_golite062009
  • small conjugating protein ligase activity
  • 9.63704265478699 bayes_pls_golite062009
  • acid-amino acid ligase activity
  • 8.59660059921406 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
  • 7.32718329074249 bayes_pls_golite062009
  • vasopressin activated calcium mobilizing receptor activity
  • 6.69190468636718 bayes_pls_golite062009
  • transcription regulator activity
  • 4.76121492612224 bayes_pls_golite062009
  • ligase activity
  • 4.08678005991666 bayes_pls_golite062009
  • transcription factor activity
  • 3.7855017556511 bayes_pls_golite062009
  • binding
  • 2.45185337633142 bayes_pls_golite062009
  • transcription repressor activity
  • 2.39237599101586 bayes_pls_golite062009
  • protein binding
  • 2.34145982999922 bayes_pls_golite062009
  • transcription activator activity
  • 2.05043065144612 bayes_pls_golite062009
  • nucleic acid binding
  • 1.54797684894025 bayes_pls_golite062009
  • DNA binding
  • 1.42215436462553 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 1.23862224095769 bayes_pls_golite062009
  • transporter activity
  • 0.891050405674973 bayes_pls_golite062009
  • transmembrane transporter activity
  • 0.648150681919233 bayes_pls_golite062009
  • transcription factor binding
  • 0.612315945412079 bayes_pls_golite062009
  • substrate-specific transporter activity
  • 0.368917395770011 bayes_pls_golite062009
  • catalytic activity
  • 0.351553138703956 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 0.249771970501337 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 0.146182977030285 bayes_pls_golite062009
  • hydrolase activity
  • 0.140191206949582 bayes_pls_golite062009
  • structure-specific DNA binding
  • 0.117670813298683 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
  • 0.107671044044222 bayes_pls_golite062009
  • transferase activity
  • 0.064832527337659 bayes_pls_golite062009
  • specific transcriptional repressor activity
  • 0.0565989703351002 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.0102780098866235 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle