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Protein Overview: YGP1

General Information:
Name(s) found: YGP1 / YNL160W [SGD]
Description(s) found:
Found 23 descriptions.
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  • Cell wall-related secretory glycoprotein; induced by nutrient deprivation-associated growth arrest and upon entry into stationary phase; may be involved in adaptation prior to stationary phase entry; has similarity to Sps100p [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 354 amino acids

    Gene Ontology:
    Cellular Component: fungal-type cell wall [TASLink to PubMed article]
    Biological Process: response to nutrient [IEPLink to PubMed article]
    response to stress [IEPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFQVVLSAL LACSSAVVAS PIENLFKYRA VKASHSKNIN STLPAWNGSN SSNVTYANGT  60
   61 NSTTNTTTAE SSQLQIIVTG GQVPITNSSL THTNYTRLFN SSSALNITEL YNVARVVNET 120
  121 IQDKSSAGAV VVANAKSLEA VSFFFSIIFD TEKPIVVTED SAYAIPVANN KNATKRGVLS 180
  181 VTSDKLVYSG VFTPPTACSY GAGLPVAIVD DQDEVKWFFD ASKPTLISSD SIIRKEYSNF 240
  241 TTPYGLLENG VPIVPIVYDG GYSSSLIDSL SSAVQGLVVV SSGSTNSTSS TIESTEIPVV 300
  301 YAQANTPLNF IDNKDVPKNA VGAGYLSPIK AQILLSIAAV NGVTSKSALE SIFP

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Ho Y, et al. (2002) ADR1 BBC1 CDC39 CDC53 CRM1 DUR1,2 ECM29 ECM33 FAA4 GAL3 GCN1 HRT1 HYP2 MDN1 MKT1 MMS1 MYO2 PFK1 PMA2 RPA190 RPN1 TPS1 UBI4 VPS13 YAR009C YGP1 YLR035C-A

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run RPA135 No Comments Schneider, DA, et al. (2006)
    View Run ZDS1 Sample 2- cpn2 from june 2005 McCusker D, et al (2007)
    View Run ZDS1 Sample 3 - cpn + atp, from june 2005 McCusker D, et al (2007)
    View Run BOI1 Sample boi 1 with ha tag from october 2005 McCusker D, et al (2007)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..250] PSI-BLAST 139.218487 Glutaminase-asparaginase
    2 View Details [251..354] PSI-BLAST 139.218487 Glutaminase-asparaginase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  2.46687464035052 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
    		•  1.00776502581712 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle