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Protein Overview: MKT1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run BIR1 No Comments Widlund PO, et al. (2005)
View Run BIR1 No Comments Widlund PO, et al. (2005)
View Run BIR1 No Comments Widlund PO, et al. (2005)
View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)
View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run ZDS1 Sample 2- cpn2 from june 2005 McCusker D, et al (2007)
View Run ZDS1 Sample 3 - cpn + atp, from june 2005 McCusker D, et al (2007)
View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data MKT1 Huh WK, et al. (2003)

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..84]
[100..248]
[303..372]
PSI-BLAST 56.30103 Flap endonuclease-1 (Fen-1 nuclease)
2 View Details [85..99]
[249..302]
PSI-BLAST 56.30103 Flap endonuclease-1 (Fen-1 nuclease)
3 View Details [373..439] PSI-BLAST 12.522879 Exonuclease domain of prokaryotic DNA polymerase; DNA polymerase I (Klenow fragment)
4 View Details [440..562] deduced N/A No confident structure predictions are available.
5 View Details [563..830] MSA 1.005883 View MSA. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • endodeoxyribonuclease activity
  • 4.18461263107599 bayes_pls_golite062009
  • deoxyribonuclease activity
  • 3.85892177341967 bayes_pls_golite062009
  • exonuclease activity
  • 3.45142689336533 bayes_pls_golite062009
  • flap endonuclease activity
  • 3.15967964087761 bayes_pls_golite062009
  • exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
  • 2.42937586057619 bayes_pls_golite062009
  • exodeoxyribonuclease activity, producing 5'-phosphomonoesters
  • 2.28283401034201 bayes_pls_golite062009
  • exodeoxyribonuclease activity
  • 2.26089375411362 bayes_pls_golite062009
  • nuclease activity
  • 2.25783328399886 bayes_pls_golite062009
  • 5'-3' exonuclease activity
  • 2.09065411241765 bayes_pls_golite062009
  • DNA binding
  • 1.80079106105882 bayes_pls_golite062009
  • nucleic acid binding
  • 1.77028256579181 bayes_pls_golite062009
  • protein binding
  • 1.53930087292625 bayes_pls_golite062009
  • endonuclease activity
  • 1.42881364561524 bayes_pls_golite062009
  • binding
  • 1.42844458880206 bayes_pls_golite062009
  • 5'-3' exodeoxyribonuclease activity
  • 1.40692088927452 bayes_pls_golite062009
  • catalytic activity
  • 1.37534898662234 bayes_pls_golite062009
  • double-stranded DNA specific exodeoxyribonuclease activity
  • 1.20639149622758 bayes_pls_golite062009
  • 5'-flap endonuclease activity
  • 0.995401458224216 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
  • 0.931536010162285 bayes_pls_golite062009
  • endodeoxyribonuclease activity, producing 5'-phosphomonoesters
  • 0.592871503540176 bayes_pls_golite062009
  • damaged DNA binding
  • 0.571529443801057 bayes_pls_golite062009
  • single-stranded DNA specific 5'-3' exodeoxyribonuclease activity
  • 0.380267633493762 bayes_pls_golite062009
  • structure-specific DNA binding
  • 0.274441095399626 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle