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Protein Overview: NAP1

Protein Complex Data

  PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
View Details Riffle et al. (2010) (Unpublished Data) CKI1 HTA2 HTZ1 KAP114 NAP1 NIS1 POB3
View Details Krogan NJ, et al. (2006) GIN4 HFD1 HTZ1 KAP114 KCC4 NAP1 PRO3 REI1 RIM11 RPS6A, RPS6B UBC8 VIP1 WTM1 YKR011C
View Details Gavin AC, et al. (2006) NAP1 NBA1 NIS1
View Details Gavin AC, et al. (2002) ARX1 BEM2 BMS1 BRX1 BUD20 CIC1 CLU1 CYR1 CYS4 DBP10 DBP9 DCP2 DPB2 DPB4 DRS1 EBP2 ERB1 FPR4 GCN1 GIN4 HAS1 HDA1 HER1 HIS3 HTZ1 INP2 IPI1 IPI3 ISW1 ISW2 KAP114 KCC4 KRE33 LHP1 LOC1 LSG1 LYS12 MAK21 MAK5 MDN1 MIS1 MOT1 MRT4 NAP1 NBA1 NIP1 NIP7 NIS1 NMD3 NOC2 NOC3 NOG1 NOG2 NOP1 NOP12 NOP15 NOP16 NOP2 NOP4 NOP56 NOP7 NPL6 NSA1 NSA2 NUG1 POL2 PRT1 PUF6 REI1 RET1 RIM11 RIX1 RIX7 RLP24 RLP7 RPA135 RPA190 RPC82 RPF1 RPF2 RPG1 RPO31 RPP2B RPT6 RRP1 RRP12 RSA3 RSA4 RTR1 SDA1 SEC7 SKI2 SNU13 SPB1 SPB4 SSC1 SSF1 STH1 TIF6 TOP1 TUB3 URB1 UTP10 UTP20 UTP22 VPS1 YGL036W YRA1 YTM1
View Details Ho Y, et al. (2002) AAC3 AIR1 AIR2 ARO4 ARP4 ARP7 ASA1 ATG17 ATG29 ATP3 CAF20 CAR2 CCT2 CCT3 CCT5 CDC25 CDC28 CDC33 CDH1 CIC1 CIS1 CKI1 CLB2 COR1 COS111 CYS4 DIG1 DIG2 DUN1 EGD1 FET4 FOL2 GAL83 GCD11 GCR2 GFA1 GIN4 GRH1 GUS1 HAP2 HAP5 HAS1 HHF1, HHF2 HIR2 HOM3 HTA1 HTB1 HXT6 IMD1 IMD3 IMD4 IPP1 IRA1 IRA2 KAP114 KRI1 KSS1 LOC1 LSP1 MAM33 MKT1 MSE1 MTQ1 MTR4 MYO2 MYO4 NAP1 NMD3 NMD5 NOP16 NOP4 NOP53 NOP56 NOP7 NSA2 OYE2 PAP2 PHO84 PIL1 PIM1 PMA1 PMD1 POL5 PRP19 PRS2 PRS3 PRS5 PSE1 PYC1 QCR2 RET1 RGC1 RHR2 RIM11 RPA135 RPC82 RPN10 RPO31 SAH1 SAP190 SEN1 SKP1 SOD1 SPE3 SPT16 SSK2 STE12 STE7 TCP1 TEC1 TIF1, TIF2 TIF6 TPS1 TSL1 UBI4 UBP15 UTP13 YDR170W-A YDR239C YER138C YER160C YHR033W YJR027W YJR028W YJU2 YNK1 YPL150W YRA1 YRA2 YTM1

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run MIH1 control 1 McCusker D, et al (2007)
View Run MIH1 control 2 McCusker D, et al (2007)
View Run MIH1 experimental1 - mih1-1 McCusker D, et al (2007)
View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
View Run ZDS1 Sample 2- cpn2 from june 2005 McCusker D, et al (2007)
View Run MLP2 #25 Asynchronous Prep3-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #24 Asynchronous Prep3-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)
View Run MLP2 #32 Asynchronous Prep-No Phosphopeptide enrichment Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen HTA1 NAP1 2 Uetz P, et al. (2000)

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data NAP1 Huh WK, et al. (2003)

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..81] deduced N/A No confident structure predictions are available.
2 View Details [82..417] Pfam 151.30103 Nucleosome assembly protein (NAP) No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • histone binding
  • 4.83364158381373 bayes_pls_golite062009
  • binding
  • 2.67502047678266 bayes_pls_golite062009
  • DNA binding
  • 1.77868687163103 bayes_pls_golite062009
  • nucleic acid binding
  • 1.77336286476068 bayes_pls_golite062009
  • protein binding
  • 1.58681138679309 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.0196905966923535 bayes_pls_golite062009
    2 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle