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Protein Overview: AIR1

Protein Complex Data

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

Microscopy / Localization Data

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View Data AIR1 Huh WK, et al. (2003)

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..99] PSI-BLAST 35.522879 HIV capsid protein, dimerisation domain
2 View Details [100..168] PSI-BLAST 24.69897 HIV nucleocapsid
3 View Details [169..233] deduced N/A No confident structure predictions are available.
4 View Details [234..360] MSA 25.029993 View MSA. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
Term Confidence Notes
  • transcription regulator activity
  • 3.04588712677166 bayes_pls_golite062009
  • DNA binding
  • 2.53317408686316 bayes_pls_golite062009
  • nucleic acid binding
  • 2.33828046499668 bayes_pls_golite062009
  • binding
  • 2.07015157850093 bayes_pls_golite062009
  • transcription factor activity
  • 2.0090791129794 bayes_pls_golite062009
  • transcription activator activity
  • 0.68790059848359 bayes_pls_golite062009
  • protein binding
  • 0.679430693038119 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.

    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle