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Protein Overview: STH1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run MIH1 control 1 McCusker D, et al (2007)
View Run MIH1 control 2 McCusker D, et al (2007)
View Run MIH1 experimental1 - mih1-1 McCusker D, et al (2007)
View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
View Run RLF2 cac1: TAP-tagged Green EM, et al (2005)
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run RLF2 phosphorylation data - cascade search Green EM, et al (2005)
View Run RLF2 identification data - first search in cascade Green EM, et al (2005)
View Run ZDS1 Sample 2- cpn2 from june 2005 McCusker D, et al (2007)
View Run ZDS1 Sample 3 - cpn + atp, from june 2005 McCusker D, et al (2007)
View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #14 Mitotic Prep2-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #11 Mitotic Prep1-TiO2 enriched, new search criteria Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data STH1 Huh WK, et al. (2003)

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..233] deduced N/A No confident structure predictions are available.
2 View Details [234..277]
[367..431]
PSI-BLAST 4.0 RecG, N-terminal domain; RecG "wedge" domain; RecG helicase domain
3 View Details [278..366]
[432..649]
PSI-BLAST 4.0 RecG, N-terminal domain; RecG "wedge" domain; RecG helicase domain
4 View Details [650..707] deduced N/A Confident ab initio structure predictions are available.
5 View Details [708..919] PSI-BLAST 3.0 Putative DEAD box RNA helicase
6 View Details [920..1146] MSA 3.390994 View MSA. No confident structure predictions are available.
7 View Details [1147..1227] deduced N/A No confident structure predictions are available.
8 View Details [1228..1359] PSI-BLAST 72.522879 GCN5

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • binding
  • 2.41724497205118 bayes_pls_golite062009
  • protein binding
  • 1.23494952402126 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
  • 2.64537357529343 bayes_pls_golite062009
  • ATP-dependent DNA helicase activity
  • 2.4348680404207 bayes_pls_golite062009
  • nucleic acid binding
  • 2.21184938313192 bayes_pls_golite062009
  • pyrophosphatase activity
  • 2.13284212711072 bayes_pls_golite062009
  • DNA binding
  • 2.12258000781149 bayes_pls_golite062009
  • transcription regulator activity
  • 2.09345198747025 bayes_pls_golite062009
  • helicase activity
  • 1.70242731830224 bayes_pls_golite062009
  • structure-specific DNA binding
  • 1.2539059700735 bayes_pls_golite062009
  • DNA-dependent ATPase activity
  • 1.2155186842031 bayes_pls_golite062009
  • motor activity
  • 1.19366988459523 bayes_pls_golite062009
  • purine NTP-dependent helicase activity
  • 1.19311444180077 bayes_pls_golite062009
  • ATP-dependent helicase activity
  • 1.19311444180077 bayes_pls_golite062009
  • microtubule motor activity
  • 1.170087579765 bayes_pls_golite062009
  • double-stranded DNA binding
  • 1.117585097627 bayes_pls_golite062009
  • transcription elongation regulator activity
  • 1.11383295816593 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 1.07968294254548 bayes_pls_golite062009
  • histone acetyltransferase activity
  • 1.05990253628867 bayes_pls_golite062009
  • lysine N-acetyltransferase activity
  • 1.05990253628867 bayes_pls_golite062009
  • catalytic activity
  • 1.00104173493322 bayes_pls_golite062009
  • transcription factor activity
  • 0.887108427603557 bayes_pls_golite062009
  • DNA helicase activity
  • 0.72881469450553 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 0.568484017802328 bayes_pls_golite062009
  • single-stranded DNA binding
  • 0.568457189190858 bayes_pls_golite062009
  • mismatched DNA binding
  • 0.31144582840038 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.243902356228423 bayes_pls_golite062009
  • RNA helicase activity
  • 0.18426050934025 bayes_pls_golite062009
  • protein binding
  • 0.170837278876362 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 0.147579541298736 bayes_pls_golite062009
  • RNA-dependent ATPase activity
  • 0.14606996093053 bayes_pls_golite062009
  • ATP-dependent RNA helicase activity
  • 0.13050483816765 bayes_pls_golite062009
  • nucleotide binding
  • 0.114848452385726 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
  • 0.113504049290503 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
  • 0.111293884322157 bayes_pls_golite062009
  • purine nucleotide binding
  • 0.10713474095071 bayes_pls_golite062009
  • purine ribonucleotide binding
  • 0.0916519414118148 bayes_pls_golite062009
  • ribonucleotide binding
  • 0.0915913646217636 bayes_pls_golite062009
  • actin binding
  • 0.0206144204131673 bayes_pls_golite062009
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.
    7 No functions predicted.
    8 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.46

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle