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Protein Overview: RSC8

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run MIH1 control 1 McCusker D, et al (2007)
View Run MIH1 control 2 McCusker D, et al (2007)
View Run MIH1 experimental1 - mih1-1 McCusker D, et al (2007)
View Run MIH1 experimental2 - mih1-2 McCusker D, et al (2007)
View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
View Run RLF2 phosphorylation data - cascade search Green EM, et al (2005)
View Run RLF2 identification data - first search in cascade Green EM, et al (2005)
View Run ZDS1 Sample 2- cpn2 from june 2005 McCusker D, et al (2007)
View Run ZDS1 Sample 3 - cpn + atp, from june 2005 McCusker D, et al (2007)
View Run MLP2 #32 Asynchronous Prep-No Phosphopeptide enrichment Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data RSC8 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..177] MSA 5.026974 View MSA. No confident structure predictions are available.
2 View Details [178..247] deduced N/A No confident structure predictions are available.
3 View Details [248..304] Pfam 21.853872 Zinc finger, ZZ type No confident structure predictions are available.
4 View Details [305..358] PSI-BLAST 2.30103 v-Myb
5 View Details [359..431] PSI-BLAST 7.0 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain; Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain
6 View Details [432..557] PSI-BLAST 7.0 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain; Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3
Term Confidence Notes
  • binding
  • 2.78710909602478 bayes_pls_golite062009
  • transcription regulator activity
  • 2.72498741013971 bayes_pls_golite062009
  • small conjugating protein ligase activity
  • 2.40569731991064 bayes_pls_golite062009
  • nucleic acid binding
  • 2.32387297115017 bayes_pls_golite062009
  • ligase activity
  • 2.30828657077565 bayes_pls_golite062009
  • ubiquitin-protein ligase activity
  • 2.29312770004164 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 2.11206038007886 bayes_pls_golite062009
  • DNA binding
  • 2.00904221080834 bayes_pls_golite062009
  • protein binding
  • 1.5975811408548 bayes_pls_golite062009
  • acid-amino acid ligase activity
  • 1.3853719864144 bayes_pls_golite062009
  • transcription factor activity
  • 1.22579085356684 bayes_pls_golite062009
  • transcription factor binding
  • 1.11842175076436 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.90321253993065 bayes_pls_golite062009
  • transcription repressor activity
  • 0.350170315296021 bayes_pls_golite062009
  • transcription coactivator activity
  • 0.255669498391574 bayes_pls_golite062009
  • transcription cofactor activity
  • 0.233838999434784 bayes_pls_golite062009
  • catalytic activity
  • 0.14112008370434 bayes_pls_golite062009
  • transcription activator activity
  • 0.126093965701234 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
  • 0.024993043379745 bayes_pls_golite062009
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle