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Protein Overview: ECM16

Protein Complex Data

  PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
View Details Riffle et al. (2010) (Unpublished Data) BFR2 BMS1 BUD23 DIP2 DIS3 ECM16 EMG1 ENP1 ENP2 FUN12 IMP3 IMP4 KRE33 KRR1 MAK5 MPP10 NAN1 NOC4 NOP1 NOP14 NOP56 PRP43 PWP2 RCL1 RPL5 RPS11A, RPS11B RPS13 RPS4B, RPS4A RPS7A RPS8B, RPS8A RRP12 RRP9 SOF1 TSR1 UTP10 UTP13 UTP15 UTP20 UTP21 UTP22 UTP30 UTP4 UTP6 UTP7 UTP8
View Details Krogan NJ, et al. (2006) ASF2 BUD23 ECM16 REB1
View Details Gavin AC, et al. (2002) ABF2 ADE4 ADH1 ASC1 BEM2 BFR2 BMS1 BRX1 BUD21 CBF5 CCM1 CFT2 CKA1 CKA2 CKB1 CKB2 CMD1 CMS1 CSL4 CTI6 CTR9 DBP8 DEP1 DIA4 DIM1 DIP2 DIS3 DOT6 EAF3 ECM16 ECM29 EHD3 EMG1 ENP1 ENP2 ERO1 ESF1 ESF2 FAP7 FIP1 FYV4 GCN1 GEP3 GLC7 HAS1 HCA4 HHF1, HHF2 HRR25 HSC82 HSL1 HTA2 IMP3 IMP4 IOC3 ISW1 KRE33 KRR1 LCP5 LRP1 LTV1 MAM33 MED4 MLC1 MPP10 MRD1 MRP1 MRP10 MRP13 MRP17 MRP21 MRP4 MRP51 MRPS16 MRPS17 MRPS18 MRPS28 MRPS5 MRPS8 MRPS9 MTR3 MVD1 MYO2 NAM9 NAN1 NHP10 NMD5 NOB1 NOC2 NOC4 NOP1 NOP12 NOP14 NOP56 NOP58 NOP6 NRD1 PAP1 PAP2 PET123 PFS2 PHO23 PNO1 PRE6 PRE9 PRP43 PSD2 PTA1 PTI1 PUS7 PWP2 RCL1 RCO1 REF2 RIO2 RIX1 RML2 RNA14 ROK1 RPD3 RPP2B RRP12 RRP4 RRP40 RRP42 RRP43 RRP45 RRP46 RRP6 RRP7 RRP9 RSC8 RSM10 RSM19 RSM22 RSM23 RSM24 RSM25 RSM26 RSM27 RSM7 RTG2 RXT2 RXT3 SAM1 SAP30 SCL1 SDS3 SEC21 SHE4 SIN3 SKI2 SKI3 SKI6 SKI7 SLX9 SNF2 SNF5 SOF1 SRO9 SRP1 STO1 SWI3 TIF1, TIF2 TIF4631 TOP1 TSR1 TUP1 UBP10 UME1 UME6 UTP10 UTP11 UTP13 UTP15 UTP18 UTP20 UTP21 UTP22 UTP30 UTP4 UTP6 UTP7 UTP8 UTP9 VPS1 YGR054W YIR035C YOR059C YSH1
View Details Qiu et al. (2008) DBP3 DBP6 DHR2 DRS1 ECM16 GAR1 MAK5 NSR1 NUG1 UTP4 UTP6

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
View Run MLP2 #32 Asynchronous Prep-No Phosphopeptide enrichment Keck JM, et al. (2011)
View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data ECM16 and NOP56 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..291] PSI-BLAST 47.30103 Heavy meromyosin subfragment
2 View Details [292..408] deduced N/A No confident structure predictions are available.
3 View Details [409..584] PSI-BLAST 4.221849 Putative DEAD box RNA helicase
4 View Details [585..695] PSI-BLAST 4.221849 Putative DEAD box RNA helicase
5 View Details [696..853] ORFEUS 12.3 Initiation factor 4a
6 View Details [854..1267] MSA 4.132947 View MSA. No confident structure predictions are available.




Philius Transmembrane Prediction:

Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification: 0.99

Source: Reynolds et al. (2008)


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle