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Protein Overview: TUP1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run ZDS1 Sample 2- cpn2 from june 2005 McCusker D, et al (2007)
View Run ZDS1 Sample 3 - cpn + atp, from june 2005 McCusker D, et al (2007)
View Run BOI1 Sample boi 1 with ha tag from october 2005 McCusker D, et al (2007)
View Run BOI1 Sample bob1 (2nd set) from october 2005 McCusker D, et al (2007)
View Run MLP2 #04 Alpha Factor Prep2 Keck JM, et al. (2011)

Yeast Two-Hybrid Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data TUP1 and NOP56 Huh WK, et al. (2003)
View Data TUP1 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..281] ORFEUS 14.54 No description for 1ldvA was found.
2 View Details [282..713] PSI-BLAST 10079.69897 Tup1, C-terminal domain
3 View Details [211..281] PSI-BLAST 71.69897 F-box/WD-repeat protein 1 (beta-TRCP1)
4 View Details [282..713] PSI-BLAST 86.39794 Tup1, C-terminal domain

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3 No functions predicted.
4
Term Confidence Notes
  • 6.67009948605948 bayes_pls_golite062009
  • acetyltransferase activity
  • 3.85374902981345 bayes_pls_golite062009
  • RNA binding
  • 3.77273677738815 bayes_pls_golite062009
  • acyltransferase activity
  • 3.35098520158193 bayes_pls_golite062009
  • actin binding
  • 3.31804728298431 bayes_pls_golite062009
  • transferase activity, transferring acyl groups other than amino-acyl groups
  • 3.31615347567536 bayes_pls_golite062009
  • GTPase activity
  • 3.23750443966606 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
  • 3.14917998298348 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 3.1056443224755 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 3.00422709839505 bayes_pls_golite062009
  • tubulin binding
  • 2.76945430061825 bayes_pls_golite062009
  • microtubule binding
  • 2.72684103222924 bayes_pls_golite062009
  • structural molecule activity
  • 2.6914565031145 bayes_pls_golite062009
  • dynein binding
  • 2.54821997913979 bayes_pls_golite062009
  • binding
  • 2.42570478946173 bayes_pls_golite062009
  • transcription regulator activity
  • 2.3610959773142 bayes_pls_golite062009
  • transcription repressor activity
  • 2.29049708962212 bayes_pls_golite062009
  • snoRNA binding
  • 2.27164613239345 bayes_pls_golite062009
  • nucleic acid binding
  • 2.00420268007946 bayes_pls_golite062009
  • dynactin binding
  • 1.92897254169098 bayes_pls_golite062009
  • DNA binding
  • 1.71685536470455 bayes_pls_golite062009
  • actin filament binding
  • 1.5197243426595 bayes_pls_golite062009
  • transcription corepressor activity
  • 1.41752877005447 bayes_pls_golite062009
  • protein binding
  • 1.21879977456466 bayes_pls_golite062009
  • transporter activity
  • 1.21549336905926 bayes_pls_golite062009
  • receptor activity
  • 1.12819778129653 bayes_pls_golite062009
  • transcription factor activity
  • 1.08768505897883 bayes_pls_golite062009
  • mRNA binding
  • 1.05053985350578 bayes_pls_golite062009
  • microtubule plus-end binding
  • 1.01166033978052 bayes_pls_golite062009
  • molecular transducer activity
  • 0.974380908248463 bayes_pls_golite062009
  • signal transducer activity
  • 0.974380908248463 bayes_pls_golite062009
  • type 1 angiotensin receptor binding
  • 0.920323565472959 bayes_pls_golite062009
  • angiotensin receptor binding
  • 0.920323565472959 bayes_pls_golite062009
  • substrate-specific transporter activity
  • 0.734793983890004 bayes_pls_golite062009
  • histone binding
  • 0.685319917508843 bayes_pls_golite062009
  • transcription factor binding
  • 0.489473003915035 bayes_pls_golite062009
  • dynein intermediate chain binding
  • 0.443846546939402 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
  • 0.426429095658617 bayes_pls_golite062009
  • kinase activity
  • 0.387572734234845 bayes_pls_golite062009
  • transcription initiation factor activity
  • 0.319410949467982 bayes_pls_golite062009
  • receptor binding
  • 0.316169754698691 bayes_pls_golite062009
  • histone methyltransferase activity
  • 0.311523647180993 bayes_pls_golite062009
  • transcription cofactor activity
  • 0.30761651528651 bayes_pls_golite062009
  • nucleotidyltransferase activity
  • 0.28606552120995 bayes_pls_golite062009
  • G-protein-coupled receptor binding
  • 0.251120087240234 bayes_pls_golite062009
  • protein kinase activity
  • 0.229242350006544 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 0.226335610368636 bayes_pls_golite062009
  • structural constituent of cytoskeleton
  • 0.118975415284669 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 0.00585398682921312 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle