| Protein: | ECM16 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1267 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ECM16.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1267] | [1..1267] |
|
|
0.0 | [1..1245] | [1..1180] |
|
|
0.0 | [237..1232] | [60..957] |
|
|
0.0 | [6..1242] | [173..1402] |
|
|
0.0 | [342..1232] | [8..808] |
|
|
0.0 | [185..1251] | [58..992] |
|
Region A: Residues: [1-291] |
1 11 21 31 41 51
| | | | | |
1 MGTYRKRFNE KARSGHMAKL KELKRIRNKQ FTRQDENDER VENPDSAPAE SSTTEPNANA 60
61 EILEPLTEEE KKMKKRKLQE LFTPKESKVS RLKKKRLDKF IEHQLKREER KTIIGKLQDY 120
121 KIDTSLLTSS KRLGEGRQTK KEEFKEALSL ERQGRGNEQT NEILYEEYEP KVWDEYGEGG 180
181 SSEDDDGEDD FEASFGSMPK PTDNEEKKSS GFIDHRPAKF GGSGLSFGFS NIKVINKESK 240
241 TPKKKYNWRQ RVEMEELKKH GKEDEMDFDT TSEDDDEEED QEEEDKMHPS E
|
| Detection Method: |  |
| Confidence: | 47.30103 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [292-408] |
1 11 21 31 41 51
| | | | | |
1 NPLEEVESAD SETGSEKFDQ NDVANEFKDW ANQEIKKLEG RDQELVTPTL NIDYKPIIRK 60
61 EDLDDGLQEA YVPINENSTR KAFYVEVSRS DEIQKARIQL PVFGEEHKIM EAIHHND
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [409-584] |
1 11 21 31 41 51
| | | | | |
1 VVIICGETGS GKTTQVPQFL YEAGFGAEDS PDYPGMVGIT QPRRVAAVSM AERVANELGD 60
61 HGHKVGYQIR FDSTAKEDTK VKFMTDGVLL REMMHDFKLT KYSSIIIDEA HERNINTDIL 120
121 IGMLSRCVRL RAKLHKENPI EHKKLKLIIM SATLRVSDFS ENKTLFPIAP PVLQVD
|
| Detection Method: | |
| Confidence: | 4.221849 |
| Match: | 1hv8A_ |
| Description: | Putative DEAD box RNA helicase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [585-695] |
1 11 21 31 41 51
| | | | | |
1 ARQFPVSIHF NRRTAFNYTD EAFRKTCKIH QKLPPGAILV FLTGQQEITH MVKRLRKEFP 60
61 FKKNSKYNKD LETPVSKMGI NSKTTDLEAE DIDFSVQVID QDKFKSAIRY E
|
| Detection Method: | |
| Confidence: | 4.221849 |
| Match: | 1hv8A_ |
| Description: | Putative DEAD box RNA helicase |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [696-853] |
1 11 21 31 41 51
| | | | | |
1 EDEGNSGNGE DEEDEEEEGF EEVLTEGQTA NDPLYVLPLY SLLPTKEQMR VFQKPPQGSR 60
61 LCIVATNVAE TSLTIPGVRY VVDSGRSKER KYNESNGVQS FEVGWVSKAS ANQRSGRAGR 120
121 TGPGHCYRLY SSAVFEHDFE QFSKPEILRM PVESIVLQ
|
| Detection Method: | |
| Confidence: | 12.3 |
| Match: | 1fuuA |
| Description: | Initiation factor 4a |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [854-1267] |
1 11 21 31 41 51
| | | | | |
1 MKSMAIHNII NFPFPTPPDR VALSKAIQLL QYLGALDNKE MITEDGKKMS LFPLSPRFSK 60
61 MLLVSDEKAC LPYIVAIVSA LSVGDPFINE FELGINEISR KPNPDENLDD KIREHDESTP 120
121 GMDPELKKEL RSKFYKSRSQ FSKLDKFSDV FRLLSVVSAM DYVPKEQKEI FMKKNFLRGK 180
181 LMEEIVKLRK QLMYIIKSNT SKENIAVVIR NEDLKSDIPS VIQIKLLKQM ICAGFVDHVA 240
241 VRADVLFPDD AKITNRTSII NIPYIPVLAT RTPNIEDCFV YIHPTSILNN LGEMPPKYML 300
301 YYSLHLGGNN KTRMNTLCDI ASTPLANIAR KGLLLTYSKP LTGQGLKTVN LSPTERYCYV 360
361 VPRFGSTVDN DLKIGWDLNP IAVHQKKQKG QWTVIKFITR KGFQTITGEE KEKK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
