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Protein Overview: RIM1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)
View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
View Run RLF2 cac1: TAP-tagged Green EM, et al (2005)
View Run BOI1 Sample boi 1 with ha tag from october 2005 McCusker D, et al (2007)
View Run BOI1 Sample bob1 (2nd set) from october 2005 McCusker D, et al (2007)
View Run MLP2 #08 Alpha Factor Prep4-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data RIM1 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..135] PSI-BLAST 33.154902 ssDNA-binding protein

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • nucleic acid binding
  • 2.69275272183315 bayes_pls_golite062009
  • single-stranded DNA binding
  • 2.3572495084765 bayes_pls_golite062009
  • structure-specific DNA binding
  • 2.34831682853439 bayes_pls_golite062009
  • binding
  • 2.25744085310968 bayes_pls_golite062009
  • DNA binding
  • 1.97161900822354 bayes_pls_golite062009
  • structural constituent of ribosome
  • 1.39029069959347 bayes_pls_golite062009
  • structural molecule activity
  • 1.10843643894126 bayes_pls_golite062009
  • nucleotidyltransferase activity
  • 0.377540062296145 bayes_pls_golite062009
  • protein binding
  • 0.360033745054291 bayes_pls_golite062009
  • ribonuclease activity
  • 0.35415853560434 bayes_pls_golite062009
  • translation regulator activity
  • 0.31332179848255 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
  • 0.263197317040851 bayes_pls_golite062009
  • nuclease activity
  • 0.192509675054684 bayes_pls_golite062009
  • transcription regulator activity
  • 0.157816897728538 bayes_pls_golite062009
  • DNA-directed RNA polymerase activity
  • 0.1542034177713 bayes_pls_golite062009
  • RNA polymerase activity
  • 0.1542034177713 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle