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Protein Overview: SPB1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run MLP2 #24 Asynchronous Prep3-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)
View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #10 Mitotic Prep1-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)
View Run MLP2 #11 Mitotic Prep1-TiO2 enriched, new search criteria Keck JM, et al. (2011)
View Run MLP2 #01 Alpha factor Prep1-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)
View Run MLP2 #28 Asynchronous Prep5-TiO2 Phosphopeptide Enrichment Keck JM, et al. (2011)
View Run MLP2 #07 Alpha Factor Prep3-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..204] PSI-BLAST 226.679424 RNA methyltransferase FtsJ
2 View Details [205..532] PSI-BLAST 16.0 Heavy meromyosin subfragment
3 View Details [533..629] PSI-BLAST 5.0 Tropomyosin
4 View Details [630..713] PSI-BLAST 5.0 Tropomyosin
5 View Details [714..841] MSA 8.703997 View MSA. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • rRNA (guanine) methyltransferase activity
  • 4.21285117944777 bayes_pls_golite062009
  • methyltransferase activity
  • 4.15445027778357 bayes_pls_golite062009
  • rRNA methyltransferase activity
  • 4.09362182773099 bayes_pls_golite062009
  • N-methyltransferase activity
  • 4.07806017452628 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
  • 4.07153733729662 bayes_pls_golite062009
  • protein methyltransferase activity
  • 3.92746815303714 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
  • 3.39429041855776 bayes_pls_golite062009
  • RNA methyltransferase activity
  • 3.07428840534971 bayes_pls_golite062009
  • histone methyltransferase activity
  • 2.99461585647365 bayes_pls_golite062009
  • DNA-methyltransferase activity
  • 2.43145108778901 bayes_pls_golite062009
  • protein-arginine N-methyltransferase activity
  • 2.41876112831625 bayes_pls_golite062009
  • arginine N-methyltransferase activity
  • 2.41876112831625 bayes_pls_golite062009
  • transferase activity
  • 2.22303238506686 bayes_pls_golite062009
  • histone-arginine N-methyltransferase activity
  • 2.04296107639729 bayes_pls_golite062009
  • RNA binding
  • 1.99752836873461 bayes_pls_golite062009
  • rRNA (adenine) methyltransferase activity
  • 1.83964463328968 bayes_pls_golite062009
  • tRNA methyltransferase activity
  • 1.76571145896453 bayes_pls_golite062009
  • rRNA (adenine-N6,N6-)-dimethyltransferase activity
  • 1.75675289134467 bayes_pls_golite062009
  • protein-arginine omega-N monomethyltransferase activity
  • 1.66871163498737 bayes_pls_golite062009
  • catalytic activity
  • 1.25333584501255 bayes_pls_golite062009
  • histone methyltransferase activity (H4-R3 specific)
  • 1.1103522853299 bayes_pls_golite062009
  • transcription regulator activity
  • 0.914549843668268 bayes_pls_golite062009
  • rRNA (uridine-2'-O-)-methyltransferase activity
  • 0.90544396691236 bayes_pls_golite062009
  • protein-arginine omega-N asymmetric methyltransferase activity
  • 0.89325812193225 bayes_pls_golite062009
  • DNA binding
  • 0.86027591375666 bayes_pls_golite062009
  • rRNA (uridine) methyltransferase activity
  • 0.742142092552002 bayes_pls_golite062009
  • site-specific DNA-methyltransferase (adenine-specific) activity
  • 0.703178429468566 bayes_pls_golite062009
  • tRNA (cytosine-5-)-methyltransferase activity
  • 0.672282175551951 bayes_pls_golite062009
  • tRNA (cytosine)-methyltransferase activity
  • 0.672282175551951 bayes_pls_golite062009
  • nucleic acid binding
  • 0.616949327277483 bayes_pls_golite062009
  • binding
  • 0.383237930789959 bayes_pls_golite062009
  • O-methyltransferase activity
  • 0.250946859465502 bayes_pls_golite062009
  • rRNA (guanine-N1-)-methyltransferase activity
  • 0.234572322347698 bayes_pls_golite062009
  • tRNA (adenine-N1-)-methyltransferase activity
  • 0.1772047818218 bayes_pls_golite062009
  • tRNA (adenine)-methyltransferase activity
  • 0.1772047818218 bayes_pls_golite062009
  • mRNA binding
  • 0.0540207721800283 bayes_pls_golite062009
  • snoRNA binding
  • 0.00848192089639488 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle