General Information: |
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Name(s) found: |
RPF1 /
YHR088W
[SGD]
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Description(s) found:
Found 28 descriptions. SHOW ALL |
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Organism: | Saccharomyces cerevisiae |
Length: | 295 amino acids |
Gene Ontology: |
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Cellular Component: |
nucleolus
[IDA![]() ![]() |
Biological Process: |
ribosome biogenesis
[RCA![]() ribosomal large subunit assembly [IPI ![]() processing of 27S pre-rRNA [IMP ![]() |
Molecular Function: |
rRNA primary transcript binding
[IPI![]() |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MALGNEINIT NKLKRQEIFA DIKHEKNKER HTMRRKRAKE ERENPELREQ RLKENVTQTI 60 61 ENTRVYDETI NKEVEGDEDD LMRYFNSNSN EPPKIFLTTN VNAKKSAYEF ANILIEILPN 120 121 VTFVKRKFGY KLKEISDICI KRNFTDIVII NEDKKKVTGL TFIHLPEGPT FYFKLSSFVE 180 181 VKKIVGHGRP TSHIPELILN NFQTRLGQTV GRLFQSILPQ NPDIEGRQVI TLHNQRDYIF 240 241 FRRHRYVFKD NERVGLQELG PQFTLKLKRL QRGIKEETEW EHKPEMDKEK KKFYL |
  | PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS |
View Details | Riffle et al. (2010) (Unpublished Data) |
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BRX1 CIC1 DBP10 DRS1 ERB1 FPR4 HAS1 IPI3 LOC1 MAK21 MAK5 MRT4 NIP7 NOC2 NOC3 NOG1 NOP15 NOP2 NOP4 NOP7 NSA1 NSA2 NUG1 PUF6 RIX1 RIX7 RLP7 RPF1 RPL25 SDA1 SPB4 TIF6 URB1 YTM1 |
View Details | Gavin AC, et al. (2006) |
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NSA1 RPF1 |
View Details | Gavin AC, et al. (2002) |
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ARX1 BEM2 BMS1 BRX1 BUD20 CIC1 CLU1 CYR1 CYS4 DBP10 DBP9 DCP2 DRS1 EBP2 ERB1 FPR4 GCN1 HAS1 HDA1 HER1 HIS3 INP2 IPI1 IPI3 KRE33 LHP1 LOC1 LSG1 MAK21 MAK5 MDN1 MIS1 MRT4 NAP1 NIP1 NIP7 NMD3 NOC2 NOC3 NOG1 NOG2 NOP1 NOP12 NOP15 NOP16 NOP2 NOP4 NOP56 NOP7 NSA1 NSA2 NUG1 PRT1 PUF6 REI1 RIX1 RIX7 RLP24 RLP7 RPA135 RPA190 RPF1 RPF2 RPG1 RPP2B RPT6 RRP1 RRP12 RSA3 RSA4 RTR1 SDA1 SEC7 SKI2 SNU13 SPB1 SPB4 SSF1 TIF6 TUB3 URB1 UTP10 UTP20 UTP22 YGL036W YTM1 |
View Details | Ho Y, et al. (2002) |
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CIC1 ERB1 RPF1 SRP54 TMA108 VPS35 YBR242W YPD1 YTM1 |
View Details | Qiu et al. (2008) |
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BRX1 NOP53 RLP7 RPF1 |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..93] | ![]() |
N/A | No confident structure predictions are available. |
2 | View Details | [94..295] | ![]() |
35.275724 | No description for PF01945 was found. No confident structure predictions are available. |
3 | View Details | [185..295] | ![]() |
1.61 | Crystal structure of probable ribosomal biogenesis protein from Aeropyrum pernix K1 |
Functions predicted (by domain):
# | Gene Ontology predictions | |||||||||||||||||||||||||||
1 | No functions predicted. | |||||||||||||||||||||||||||
2 |
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3 | No functions predicted. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)