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Protein Overview: SPT16

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run BOI1 Sample boi 1 with ha tag from october 2005 McCusker D, et al (2007)
View Run MLP2 #04 Alpha Factor Prep2 Keck JM, et al. (2011)
View Run MLP2 #13 Mitotic Prep2-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)
View Run MLP2 #10 Mitotic Prep1-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data SPT16 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..171] PSI-BLAST 80.045757 Aminopeptidase P; Aminopeptidase P, C-terminal domain
2 View Details [172..468] PSI-BLAST 80.045757 Aminopeptidase P; Aminopeptidase P, C-terminal domain
3 View Details [469..523] deduced N/A No confident structure predictions are available.
4 View Details [524..773] MSA 1.016941 View MSA. No confident structure predictions are available.
5 View Details [774..918] deduced N/A No confident structure predictions are available.
6 View Details [919..1035] MSA 3.018996 View MSA. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • transcription regulator activity
  • 2.3228898238998 bayes_pls_golite062009
  • DNA binding
  • 1.6830709273154 bayes_pls_golite062009
  • nucleic acid binding
  • 1.67660713848062 bayes_pls_golite062009
  • binding
  • 1.4562583231987 bayes_pls_golite062009
  • transcription factor activity
  • 1.02226978078776 bayes_pls_golite062009
  • protein binding
  • 0.170797254754318 bayes_pls_golite062009
  • catalytic activity
  • 0.148551873544128 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle