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Protein Overview: YHR035W

General Information:
Name(s) found: YHR035W [SGD]
Description(s) found:
Found 21 descriptions.
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  • Putative protein of unknown function; not an essential gene [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 630 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCSPTNFLYE PFSSDAVTQN YDQNLKCTKC GAYYSMACSL REQNVWTCLF CNQSNSNAEL  60
   61 PLVPSNTYTL TSAKKEILSR RTIMIIDAIC DPHELNYLVS ILCNNYITRQ QEPLSIITIQ 120
  121 QSGHVILHNA VNHRRDAVFS INEFMTKYNL DKLNASYFEK KISEINQESY WFDKSTQGSL 180
  181 RKLLREICKI ANKVNISSKR DKRCTGLALF VSSVLASQCS LSAYCHIVSF LNGPCTKGGG 240
  241 KVMSRERGES MRQNHHFESK SSQLQLSKSP TKFYKKMLEK FANQSLIYEF FIASLDQIGI 300
  301 LEMSPLITSS MAVSQFDSFN DERFAMSFQK YLNLRDHNAI YNCHSKIMTA KNAIVVKDFP 360
  361 KYSLNPKNLS LPLEISLGHN SAEAPIQFQT TFENQTEKYI RIETLLLPKA NRSFGAQNEI 420
  421 VFSMKKIASR IIDSFAYSSK HTKELMKQLF LLPNQIRGKD VDMVNLIQWC YHIYRSPILS 480
  481 VRNTSPDERY LFLHRIINAS KDTCLSLCKP FIWSYSDLKH DWIVLDVPLT RAQILQDDKT 540
  541 TICVDGGSYL VLRRGKLLEK EGRELCCKLL NDLQRFPQPL YVETKTGGSQ DRFLKSKIIP 600
  601 LDITDKETLG TEDMTFNEYF NLFTDLSGSK

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) ARA2 AYT1 BRO1 CDC73 CTR9 GLO4 HHT1, HHT2 LEO1 PAF1 PML39 POB3 PSH1 RTF1 SEN1 SPT16 YHR035W

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #24 Asynchronous Prep3-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..56] MSA 1.041985 View MSA. No confident structure predictions are available.
    2 View Details [57..139] deduced N/A No confident structure predictions are available.
    3 View Details [140..481] MSA 1.049938 View MSA. No confident structure predictions are available.
    4 View Details [482..630] PSI-BLAST 2.69897 Severin, domain 2


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle