| General Information: |
|
| Name(s) found: |
LEO1 /
YOR123C
[SGD]
|
| Description(s) found:
Found 31 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 464 amino acids |
Gene Ontology: |
|
| Cellular Component: |
nucleus
[IDA ]
transcription elongation factor complex [IPI ]
Cdc73/Paf1 complex [IPI ][TAS]
|
| Biological Process: |
histone methylation
[IMP]
telomere maintenance [IMP ]
transcription from RNA polymerase II promoter [IMP ]
RNA elongation from RNA polymerase II promoter [IPI ]
|
| Molecular Function: |
RNA polymerase II transcription elongation factor activity
[IPI]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MSSESPQDQP QKEQISNNVG VTTNSTSNEE TSRSQDDNVK EVNGNDDTKE EEQEEDAELD 60
61 DLFGDDNDDD DDDDVKKSET EKSDSDSDED DEGENINHRS RHRESLGLDD DEAEEQAMYT 120
121 RKFYGEDANN FSDQDETTHT FKEENVELVR HIIPSKANVN ETASHNEIFY ARIPNFLTID 180
181 PIPFDPPSFE AKVNERASNS ASREDQLDDR LIDENTVRWR YSRDKDQHVF KESNTQIVQW 240
241 SDGTYSLKVG EECTDILVND TSNTFLTVSH DQQELIQCYE GGEIKKTLMF IPTSTNSKIH 300
301 QKLSKAVIRR NQRQSKGPGT YIVSMDPEVE KKELERKQSQ ILRDRRRRQL KEKEKQESPD 360
361 AAFETGFRKQ NSPTTYGASR RNEYEEDDFL VDDDEEEEAA FDDEEDDNEE EEEEEDADEE 420
421 NASRLRNLKR EGAAMYREEE EEEKDRSETK RRRVAVIEDD EDED |
| PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS | |
| View Details | Riffle et al. (2010) (Unpublished Data) |
|
CDC73 CKA1 CKA2 CKB1 CKB2 CTR9 LEO1 PAF1 POB3 RTF1 SPT16 |
| View Details | Krogan NJ, et al. (2006) |
|
ARA2 AYT1 BRO1 CDC73 CTR9 GLO4 HHT1, HHT2 LEO1 PAF1 PML39 POB3 PSH1 RTF1 SEN1 SPT16 YHR035W |
| View Details | Gavin AC, et al. (2002) |
|
CDC73 CKA1 CKA2 CKB1 CKB2 CTR9 IML1 LEO1 LYS12 PAF1 POB3 RTF1 SPT16 |
| View Details | Qiu et al. (2008) |
|
CDC73 CHD1 CTR9 ELA1 ELC1 LEO1 PAF1 RTF1 SPT5 TFB5 |
The following runs contain data for this protein:
| BAIT | COMMENTS | PUBLICATION | |
| View Run | sample cbf3 from feb 2005 | Sandall S, et all (2006) | |
| View Run | No Comments | Schneider, DA, et al. (2006) | |
| View Run | Sample 2- cpn2 from june 2005 | McCusker D, et al (2007) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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| PROTEIN(S) | PUBLICATION | |
| View Data |
|
Huh WK, et al. (2003) |
Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..181] |  |
2.010996 | View MSA. No confident structure predictions are available. |
| 2 | View Details | [182..464] | |
N/A | No confident structure predictions are available. |
| 3 | View Details | [166..240] | |
2.044993 | View MSA. No confident structure predictions are available. |
| 4 | View Details | [241..464] | |
2.044977 | View MSA. No confident structure predictions are available. |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)