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Protein Overview: YKR011C

General Information:
Name(s) found: YKR011C [SGD]
Description(s) found:
Found 27 descriptions.
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  • Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nucleus [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 353 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKLETVYLY AGEEQPRVKL TCIKEGLTLT QVIKFVHSIQ ELYGIELQTS ETITENLKID  60
   61 CAPAYLKPNC IPHFYILEYE EISDTFFIWK SDGRWQLNKL SALLYVDNDA NVVKNTSWKE 120
  121 VFQNDQRFKN YDKRAWLQNC LEKMNRDLSK LNVEQFWSQY DKICQSIAKQ KKKQEQFNME 180
  181 VFDNFKNIVS IAIIKTKVLS NKRLLTTTLK NYHNSMKKKY NIQEQNLKEN SLASCSNNEP 240
  241 SASLESESRH FSPVNSLSPS SLSTDDEAVS TDYIYKGPES KPNVNFMHSS ATNDLIKSNF 300
  301 ESYFKLMAED YETFDLRAWS RQRPRKFQLV EKKKITKNPP NSHHPHKNGK ISF

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) GIN4 HFD1 HTZ1 KAP114 KCC4 NAP1 PRO3 REI1 RIM11 RPS6A, RPS6B UBC8 VIP1 WTM1 YKR011C

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YKR011C Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..131] deduced N/A No confident structure predictions are available.
    2 View Details [132..353] MSA 1.002885 View MSA. No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle