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Protein Overview: ASA1

General Information:
Name(s) found: ASA1 / YPR085C [SGD]
Description(s) found:
Found 19 descriptions.
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  • Putative protein of unknown function; subunit of the ASTRA complex (Rvb1p, Rvb2p, Tra1p, Tti1p, Tti2, Asa1p and Tra1p) which is part of the chromatin remodeling machinery [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 443 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGFSNEIIL KRTLTLSDFT LRYHKRGITA LQVIKAPSVS NVPVLLSGDN YGYFVMWDLV  60
   61 TKRPITHIEI EGNSHIIAFW WVETTNVLYI LSKDSMLRIF ELDSSTQLSI DLVRKLSQAN 120
  121 KTDHLQWTKI YEMPINTLNF ANFIIEAEVK PTKDNKSYRL VCCHTDDSET IDIYQIIEDS 180
  181 TFKLKRPFNN INFPRFLKQQ NFLGISKDSK FGIIMRFAKL NDVIFLGYEN GFVVGFKITF 240
  241 DEGLQRDIAE LVHVSNDHYP NPILDMCVSG DELYSCSTDD FITKYKIPVN LQLETKYLRD 300
  301 DALLIKCPSS LRVSEPSKVH LPLKNIGHID KVKDDYLVVS SWSGMTIVYN MRTSEVEQTF 360
  361 VKSKNNLVVS DSSMGDLTNG SGSNTESSSK SHNYKVGAMT CLESFDVQSD GLRLGQLRRI 420
  421 KALAKCNWCL IGYEDGTIKL NKI

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Ho Y, et al. (2002) AAC3 ARP4 ASA1 ATG17 ATG29 ATP3 CDC33 CIC1 CIS1 CYS4 FOL2 GRH1 HAP2 HAP5 IPP1 LOC1 MAM33 MTQ1 NAP1 NMD5 NOP16 NSA2 POL5 PSE1 RHR2 SAH1 SAP190 SPE3 SSK2 TIF1, TIF2 TIF6 YRA1 YRA2 YTM1

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data ASA1 and SPC42 Unpublished Data
    View Data ASA1 and SPC42 Unpublished Data

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..443] PSI-BLAST 23.0 Actin interacting protein 1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.83286470399158 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.40004045504145 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.25687092973217 bayes_pls_golite062009
  • snoRNA binding
    		•  1.00962775941017 bayes_pls_golite062009
  • protein binding
    		•  0.966438459803277 bayes_pls_golite062009
    		• 0.88172763425403 bayes_pls_golite062009
  • DNA binding
    		•  0.711274653406079 bayes_pls_golite062009
  • microtubule binding
    		•  0.568163217545939 bayes_pls_golite062009
  • tubulin binding
    		•  0.394112494353147 bayes_pls_golite062009
  • ligase activity
    		•  0.280267687917718 bayes_pls_golite062009
  • transcription factor activity
    		•  0.243992994917491 bayes_pls_golite062009
  • RNA binding
    		•  0.0914092269020899 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.084112683169759 bayes_pls_golite062009


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle