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Protein Overview: MMS4

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run MLP2 #19 Asynchronous Prep1-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)
View Run MLP2 #34 Asynchronous SPB prep Keck JM, et al. (2011)
View Run MLP2 #19b Asynchronous Prep1-new search criteria Keck JM, et al. (2011)
View Run MLP2 #19a Asynchronous Prep1-new search criteria Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen SLA1 MMS4 2 Unpublished Fields Lab Data
View Screen NAS2 MMS4 2 Unpublished Fields Lab Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data MMS4 Huh WK, et al. (2003)

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..394] FFAS03 1.28 THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA
2 View Details [395..456] deduced N/A No confident structure predictions are available.
3 View Details [457..691] FFAS03 1.6 XPF from Aeropyrum pernix, complex with DNA

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3
Term Confidence Notes
  • four-way junction helicase activity
  • 9.97778352333441 bayes_pls_golite062009
  • DNA helicase activity
  • 7.39534793109438 bayes_pls_golite062009
  • endodeoxyribonuclease activity
  • 3.3215200974849 bayes_pls_golite062009
  • single-stranded DNA specific endodeoxyribonuclease activity
  • 3.18118446093396 bayes_pls_golite062009
  • deoxyribonuclease activity
  • 3.15144163151183 bayes_pls_golite062009
  • excinuclease ABC activity
  • 2.93145997831744 bayes_pls_golite062009
  • DNA binding
  • 2.86703202962507 bayes_pls_golite062009
  • nucleic acid binding
  • 2.70608150305499 bayes_pls_golite062009
  • structure-specific DNA binding
  • 2.54099670773663 bayes_pls_golite062009
  • single-stranded DNA binding
  • 2.43123013915603 bayes_pls_golite062009
  • binding
  • 2.15665005558542 bayes_pls_golite062009
  • helicase activity
  • 1.95147423101621 bayes_pls_golite062009
  • damaged DNA binding
  • 1.93355995630071 bayes_pls_golite062009
  • nuclease activity
  • 1.53464565125134 bayes_pls_golite062009
  • endonuclease activity
  • 1.2384221353329 bayes_pls_golite062009
  • pyrophosphatase activity
  • 0.868370062080145 bayes_pls_golite062009
  • catalytic activity
  • 0.776505703815067 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
  • 0.757551245363434 bayes_pls_golite062009
  • protein binding
  • 0.687937183662529 bayes_pls_golite062009
  • double-stranded DNA binding
  • 0.593379763919056 bayes_pls_golite062009
  • DNA strand annealing activity
  • 0.591712648797139 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle