| Protein: | ECM29 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1868 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ECM29.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1868] | [1..1868] |
|
|
0.0 | [14..1719] | [7..1663] |
|
|
0.0 | [418..1694] | [9..1267] |
|
|
0.0 | [421..1753] | [1246..2611] |
|
|
0.0 | [442..1678] | [1230..2449] |
|
Region A: Residues: [1-151] |
1 11 21 31 41 51
| | | | | |
1 MSISSDEAKE KQLVEKAELR LAIADSPQKF ETNLQTFLPP LLLKLASPHA SVRTAVFSAL 60
61 KNLISRINTL PQVQLPVRAL IVQAKEPNLA AQQDSTNVRL YSLLLASKGI DRLSLQDRQQ 120
121 LLPLVVSNIS CLTGTVAARM FHILLKLILE W
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| hydrolase activity | 2.62777210765927 | bayes_pls_golite062009 |
| binding | 2.26699794423696 | bayes_pls_golite062009 |
| nucleic acid binding | 0.954891553462304 | bayes_pls_golite062009 |
| protein binding | 0.867374463164997 | bayes_pls_golite062009 |
| DNA binding | 0.0652553830451623 | bayes_pls_golite062009 |
|
Region A: Residues: [152-525] |
1 11 21 31 41 51
| | | | | |
1 VAPQESSHEQ EEFVQFLQLD NDGFSFLMRQ FTRFFLLVPS KQVQVSQQPL SRGYTCPGLS 60
61 LTDVAFFTYD AGVTFNKEQL NKFKKAIFQF VCRGMAATQT IEQSPRMIEL MEFLCVVSTD 120
121 STNLSDDAAQ FMKRFPMPYE NEEFITFLQT LYIGNTANGR PPVKAILQEK ILSILNRSHF 180
181 ATTKAECISL ICSIGLHSSE YKLRSLTLSF IRHVAKLNYK NLNPASSSPS STDFSTCIVS 240
241 LIRNNLHAEG WPKLQLGPQT PAFNTAILQR QLQYETLGDI LKRDFELVSD LSYIEFLFES 300
301 LKNDLPQFRS SIQESLLSLV GHLSILPQQS KLKLKNLLRK NLSIDEQQRE DNNDAVNSIM 360
361 ALKFVSIKFT NAAF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| hydrolase activity | 2.5894939457048 | bayes_pls_golite062009 |
| binding | 2.37294644142029 | bayes_pls_golite062009 |
| nucleic acid binding | 1.00618489031368 | bayes_pls_golite062009 |
| protein binding | 0.992946510849437 | bayes_pls_golite062009 |
| DNA binding | 0.0559585284546991 | bayes_pls_golite062009 |
|
Region A: Residues: [526-878] |
1 11 21 31 41 51
| | | | | |
1 PFHDPEARLF NIWGTVRTNR FDIIEESFKG LQPFWFRVNN ASINTSATVK TSDLLGSHLS 60
61 ETEFPPFREF LQVLIDQLDS EAASITRKSL NNAVRFSKQC LISNAIYGKK TMVIQDEDWS 120
121 VRIDKALELD DTVVSRVNEM VQGMNDDIFI RYLTLLSNEF TATNSKGEQI AIFPYQDPIF 180
181 GSVLLTLLNF VSNNVLRRLE ILVPDLYHLV IMKFQSLSDN DLAVCATIIG IISTAIADST 240
241 HVKRITKIAQ SQTMAETYVA SYVVPRLYLK DQTNHIESDS ILNLLNILTT HLSHPGTNKD 300
301 MILKLVCQVT KFGLLLQVSA QERKDFLKKV MDTIQDKLIN DVTAIQTWSY LSL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [879-1022] |
1 11 21 31 41 51
| | | | | |
1 YSTDLENSSL FQEKLLETNV SKQNDFLFSV GESLSVVAGK WSSKYLIKQI DIPNFNVEIM 60
61 QQKFPATNVT TILDEIFSGC DSTKPSLRKA SCIWLLSYIQ YLGHLPEVSS KCNDIHLRFM 120
121 RFLADRDEFI QDSAARGLSL VYEI
|
| Detection Method: | |
| Confidence: | 46.0 |
| Match: | 1f59A_ |
| Description: | Importin beta |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1023-1153] |
1 11 21 31 41 51
| | | | | |
1 GGSDLKESMV KGLLKSFTES TAGSASTSAT GISGSVSEET ELFEPGVLNT GDGSISTYKD 60
61 ILNLASEVGD PALVYKFMSL AKSSALWSSR KGIAFGLGAI MSKSSLEELL LKDQQTAKKL 120
121 IPKLYRYRFD P
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1154-1629] |
1 11 21 31 41 51
| | | | | |
1 FQAVSRSMTD IWNTLIPESS LTISLYFNDI LDELLCGMAN KEWRVREAST SALLQLIQSQ 60
61 PQEKFSEKML KIWTMAFRTM DDIKDSVREV GTKFTTVLAK ILARSIDVEK GVNPTKSKEI 120
121 LDNILPFLWG PHGLNSDAEE VRNFALTTLI DLVKHSPGAI KPFTPKLIYD FITLFSSIEP 180
181 QVINYLALNA ANYNIDANVI DTQRKNGVTN SPLFQTIEKL INNSDDCMME EIINVVIKAS 240
241 RKSVGLPSKV ASSLVIIILV KRYSIEMKPY SGKLLKVCLT MFEDRNESVN IAFAISMGYL 300
301 FKVSALDKCI KYSEKLITKY FEPTSTENNK KVVGTAIDSI LNYAKSEFDN VASVFMPLIF 360
361 IACNDEDKDL ETLYNKIWTE ASSSGAGTVK LYLPEILNVL CVNIKSNDFS IRKTCAKSVI 420
421 QLCGGINDSI PYPQIVKLFD ISREALSGRS WDGKEHIVAA LVSLTEKFSQ TVADNN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1630-1868] |
1 11 21 31 41 51
| | | | | |
1 DLQESINHVM YTEVSRKSMK YVKKILPLYA RYINVNPQEE TITFLIEKAK EMIRLLGSES 60
61 DDSEGSIKQT SDESTIKRIK PNTEITQKSS KENIENEEYV INLLKVSVDI CNNSKSRYPM 120
121 NLLEFIIDEI AYLFHNDRII HTWRTQLAAS EIGISIVGRF STISSADFIQ NVGRLWDQTF 180
181 PINCNKETIE NVKLQMIKFG GLIIQKIPSL QNNIEENLRL LNSIDSTSRI ELELKNIGL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
