| Protein: | ECM29 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1868 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ECM29.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1868] | [1..1868] |
|
|
0.0 | [14..1719] | [7..1663] |
|
|
0.0 | [418..1694] | [9..1267] |
|
|
0.0 | [421..1753] | [1246..2611] |
|
|
0.0 | [442..1678] | [1230..2449] |
|
Region A: Residues: [1-151] |
1 11 21 31 41 51
| | | | | |
1 MSISSDEAKE KQLVEKAELR LAIADSPQKF ETNLQTFLPP LLLKLASPHA SVRTAVFSAL 60
61 KNLISRINTL PQVQLPVRAL IVQAKEPNLA AQQDSTNVRL YSLLLASKGI DRLSLQDRQQ 120
121 LLPLVVSNIS CLTGTVAARM FHILLKLILE W
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.788 | 0.160 | proteasome complex | a.118.8 | TPR-like |
| View | Download | 0.626 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.605 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.601 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.571 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.567 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.564 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.502 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.492 | N/A | N/A | a.146.1 | Telomeric repeat binding factor (TRF) dimerisation domain |
| View | Download | 0.492 | N/A | N/A | a.118.12 | Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain |
| View | Download | 0.455 | N/A | N/A | a.118.12 | Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain |
| View | Download | 0.449 | N/A | N/A | a.24.1 | Apolipoprotein |
| View | Download | 0.427 | N/A | N/A | a.118.12 | Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain |
| View | Download | 0.414 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.406 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.398 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.393 | N/A | N/A | a.118.12 | Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain |
| View | Download | 0.392 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.391 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.389 | N/A | N/A | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.378 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.377 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.364 | N/A | N/A | a.118.12 | Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain |
| View | Download | 0.363 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.362 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.359 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.356 | N/A | N/A | d.224.1 | SufE-like |
| View | Download | 0.356 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.351 | N/A | N/A | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
| View | Download | 0.330 | N/A | N/A | d.110.2 | GAF domain-like |
| View | Download | 0.317 | N/A | N/A | a.89.1 | Methyl-coenzyme M reductase alpha and beta chain C-terminal domain |
| View | Download | 0.315 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.312 | N/A | N/A | c.95.1 | Thiolase-like |
| View | Download | 0.304 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.303 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.299 | N/A | N/A | a.63.1 | Apolipophorin-III |
| View | Download | 0.296 | N/A | N/A | a.118.12 | Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain |
| View | Download | 0.291 | N/A | N/A | d.17.4 | NTF2-like |
| View | Download | 0.284 | N/A | N/A | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.271 | N/A | N/A | c.55.6 | DNA repair protein MutS, domain II |
| View | Download | 0.268 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.268 | N/A | N/A | a.63.1 | Apolipophorin-III |
| View | Download | 0.264 | N/A | N/A | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.255 | N/A | N/A | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.254 | N/A | N/A | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
| View | Download | 0.253 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.252 | N/A | N/A | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.250 | N/A | N/A | a.118.12 | Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain |
| View | Download | 0.247 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.243 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.243 | N/A | N/A | a.102.3 | Chondroitin AC/alginate lyase |
| View | Download | 0.241 | N/A | N/A | a.118.12 | Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain |
| View | Download | 0.238 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.234 | N/A | N/A | c.64.1 | Pyruvate-ferredoxin oxidoreductase, PFOR, domain III |
| View | Download | 0.233 | N/A | N/A | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
| View | Download | 0.232 | N/A | N/A | a.89.1 | Methyl-coenzyme M reductase alpha and beta chain C-terminal domain |
| View | Download | 0.231 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.230 | N/A | N/A | a.91.1 | Regulator of G-protein signalling, RGS |
| View | Download | 0.229 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.225 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.224 | N/A | N/A | d.58.34 | Formiminotransferase domain of formiminotransferase-cyclodeaminase. |
| View | Download | 0.223 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.222 | N/A | N/A | a.102.3 | Chondroitin AC/alginate lyase |
| View | Download | 0.221 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.221 | N/A | N/A | a.118.12 | Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain |
| View | Download | 0.218 | N/A | N/A | d.110.2 | GAF domain-like |
| View | Download | 0.216 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.216 | N/A | N/A | d.211.1 | Ankyrin repeat |
| View | Download | 0.216 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.215 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.208 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.207 | N/A | N/A | a.24.11 | Bacterial GAP domain |
| View | Download | 0.203 | N/A | N/A | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.203 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.201 | N/A | N/A | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.201 | N/A | N/A | a.4.3 | ARID-like |
| Term | Confidence | Notes |
| hydrolase activity | 2.62777210765927 | bayes_pls_golite062009 |
| binding | 2.26699794423696 | bayes_pls_golite062009 |
| nucleic acid binding | 0.954891553462304 | bayes_pls_golite062009 |
| protein binding | 0.867374463164997 | bayes_pls_golite062009 |
| DNA binding | 0.0652553830451623 | bayes_pls_golite062009 |
|
Region A: Residues: [152-525] |
1 11 21 31 41 51
| | | | | |
1 VAPQESSHEQ EEFVQFLQLD NDGFSFLMRQ FTRFFLLVPS KQVQVSQQPL SRGYTCPGLS 60
61 LTDVAFFTYD AGVTFNKEQL NKFKKAIFQF VCRGMAATQT IEQSPRMIEL MEFLCVVSTD 120
121 STNLSDDAAQ FMKRFPMPYE NEEFITFLQT LYIGNTANGR PPVKAILQEK ILSILNRSHF 180
181 ATTKAECISL ICSIGLHSSE YKLRSLTLSF IRHVAKLNYK NLNPASSSPS STDFSTCIVS 240
241 LIRNNLHAEG WPKLQLGPQT PAFNTAILQR QLQYETLGDI LKRDFELVSD LSYIEFLFES 300
301 LKNDLPQFRS SIQESLLSLV GHLSILPQQS KLKLKNLLRK NLSIDEQQRE DNNDAVNSIM 360
361 ALKFVSIKFT NAAF
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
| Term | Confidence | Notes |
| hydrolase activity | 2.5894939457048 | bayes_pls_golite062009 |
| binding | 2.37294644142029 | bayes_pls_golite062009 |
| nucleic acid binding | 1.00618489031368 | bayes_pls_golite062009 |
| protein binding | 0.992946510849437 | bayes_pls_golite062009 |
| DNA binding | 0.0559585284546991 | bayes_pls_golite062009 |
|
Region A: Residues: [526-878] |
1 11 21 31 41 51
| | | | | |
1 PFHDPEARLF NIWGTVRTNR FDIIEESFKG LQPFWFRVNN ASINTSATVK TSDLLGSHLS 60
61 ETEFPPFREF LQVLIDQLDS EAASITRKSL NNAVRFSKQC LISNAIYGKK TMVIQDEDWS 120
121 VRIDKALELD DTVVSRVNEM VQGMNDDIFI RYLTLLSNEF TATNSKGEQI AIFPYQDPIF 180
181 GSVLLTLLNF VSNNVLRRLE ILVPDLYHLV IMKFQSLSDN DLAVCATIIG IISTAIADST 240
241 HVKRITKIAQ SQTMAETYVA SYVVPRLYLK DQTNHIESDS ILNLLNILTT HLSHPGTNKD 300
301 MILKLVCQVT KFGLLLQVSA QERKDFLKKV MDTIQDKLIN DVTAIQTWSY LSL
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| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [879-1022] |
1 11 21 31 41 51
| | | | | |
1 YSTDLENSSL FQEKLLETNV SKQNDFLFSV GESLSVVAGK WSSKYLIKQI DIPNFNVEIM 60
61 QQKFPATNVT TILDEIFSGC DSTKPSLRKA SCIWLLSYIQ YLGHLPEVSS KCNDIHLRFM 120
121 RFLADRDEFI QDSAARGLSL VYEI
|
| Detection Method: | |
| Confidence: | 46.0 |
| Match: | 1f59A_ |
| Description: | Importin beta |
Matching Structure (courtesy of the PDB): |
|
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Region A: Residues: [1023-1153] |
1 11 21 31 41 51
| | | | | |
1 GGSDLKESMV KGLLKSFTES TAGSASTSAT GISGSVSEET ELFEPGVLNT GDGSISTYKD 60
61 ILNLASEVGD PALVYKFMSL AKSSALWSSR KGIAFGLGAI MSKSSLEELL LKDQQTAKKL 120
121 IPKLYRYRFD P
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.293 | a.77.1 | DEATH domain |
| View | Download | 0.266 | c.30.1 | PreATP-grasp domain |
| View | Download | 0.276 | a.74.1 | Cyclin-like |
| View | Download | 0.314 | a.91.1 | Regulator of G-protein signalling, RGS |
| View | Download | 0.438 | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
| View | Download | 0.253 | d.95.2 | Homing endonucleases |
| View | Download | 0.228 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.212 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.207 | d.94.1 | HPr-like |
| View | Download | 0.206 | a.22.1 | Histone-fold |
| View | Download | 0.206 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.205 | a.40.1 | Calponin-homology domain, CH-domain |
|
Region A: Residues: [1154-1629] |
1 11 21 31 41 51
| | | | | |
1 FQAVSRSMTD IWNTLIPESS LTISLYFNDI LDELLCGMAN KEWRVREAST SALLQLIQSQ 60
61 PQEKFSEKML KIWTMAFRTM DDIKDSVREV GTKFTTVLAK ILARSIDVEK GVNPTKSKEI 120
121 LDNILPFLWG PHGLNSDAEE VRNFALTTLI DLVKHSPGAI KPFTPKLIYD FITLFSSIEP 180
181 QVINYLALNA ANYNIDANVI DTQRKNGVTN SPLFQTIEKL INNSDDCMME EIINVVIKAS 240
241 RKSVGLPSKV ASSLVIIILV KRYSIEMKPY SGKLLKVCLT MFEDRNESVN IAFAISMGYL 300
301 FKVSALDKCI KYSEKLITKY FEPTSTENNK KVVGTAIDSI LNYAKSEFDN VASVFMPLIF 360
361 IACNDEDKDL ETLYNKIWTE ASSSGAGTVK LYLPEILNVL CVNIKSNDFS IRKTCAKSVI 420
421 QLCGGINDSI PYPQIVKLFD ISREALSGRS WDGKEHIVAA LVSLTEKFSQ TVADNN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1630-1868] |
1 11 21 31 41 51
| | | | | |
1 DLQESINHVM YTEVSRKSMK YVKKILPLYA RYINVNPQEE TITFLIEKAK EMIRLLGSES 60
61 DDSEGSIKQT SDESTIKRIK PNTEITQKSS KENIENEEYV INLLKVSVDI CNNSKSRYPM 120
121 NLLEFIIDEI AYLFHNDRII HTWRTQLAAS EIGISIVGRF STISSADFIQ NVGRLWDQTF 180
181 PINCNKETIE NVKLQMIKFG GLIIQKIPSL QNNIEENLRL LNSIDSTSRI ELELKNIGL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
