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Protein Overview: YLR241W

General Information:
Name(s) found: YLR241W [SGD]
Description(s) found:
Found 25 descriptions.
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  • Putative protein of unknown function, may be involved in detoxification [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 782 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSYIERLKS AASYLDTVPD EHHDFRKPTA KVVTTQLTIA TSLGIFALLS FSILLKKWPR  60
   61 LYASRRYKDD GNLRLPSWNQ SSLFGWLTVL YKIRDEQILE YAGLDAYVFL SFFKMCIKLL 120
  121 SIFCFFSVCV ISPVRYHFTG KIDDGNDDDD SESSLIHLVK RIVEGSGDGD NHSAPERTNV 180
  181 YLWMYVLFTY FFTFIAIKMA VAETKHVVST RQAYLGKQNT ITDRTIRLSG IPIELRDSEA 240
  241 LKTRIEQLKI GTVSSITICR EWGPLNKLFH CRKKILKNLE LKYSECPREL RTRQPYSENY 300
  301 HLLGNEQSGA VTHGENVPSS NNNDEDTILY SQISLGERPK MKIGYRGIFG KEVDAIEYLE 360
  361 QQLKFIDAEI IEARKQHYSA TPTAFVTMDS VANAQMAAQA VLDPRVHYFI TRLAPAPHDI 420
  421 KWDHVCLSRK DRLTKVYSTT VFIGLSSLFL VIPVSYLATL LNLKTLSKFW PSVGQLLKDH 480
  481 QWAANIVTGL LPTYLFTLLN FGIPYFYEYL TSYQGLVSYS EEEISLVSKN FFYIFVNLFL 540
  541 VFTLAGTASN YWAYLSDTTK IAYQLATSVK EFSLFYVDLI ILQGIGMFPF KLLLVGSLIG 600
  601 FPLVKIKAKT PRQRNELYNP PIFNFGLQLP QPILILIITL IYSVMSTKIL TSGLAYFIIG 660
  661 FYVYKYQLIF ATDHLPHSTG KVWPLIFRRI IVGLLLFQLT MTGTLAGFEG GWVLSSCLFP 720
  721 LPVVTLCFLY DFEKNYLPLS KYIALSSIRE YERDNSTVNS ANEEESYAYP YAVSELEGPM 780
  781 LD

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Ho Y, et al. (2002) AHP1 ARC18 ARC35 ARC40 ARP2 ARP3 CDC39 DCS1 DCS2 GDB1 NIP1 NOP4 POB3 RAD50 SSZ1 TSA2 UBP15 UBR1 VPS1 YAK1 YLR241W YNL040W YPL247C

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run RPA135 No Comments Schneider, DA, et al. (2006)
    View Run VAM3 sample: hx3 Hao Xu, et al. (2010)
    View Run VAM3 Sample: HX11 - both fusion and trans-SNARE complex formation take place. Hao Xu, et al. (2010)
    View Run VAM3 Sample: HX12 - trans-SNARE complex formation and fusion are inhibited (control). Hao Xu, et al. (2010)
    View Run VAM3 Sample: HX14 - mixture in detergent (control). Hao Xu, et al. (2010)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..326] MSA 2.033952 View MSA. No confident structure predictions are available.
    2 View Details [327..782] Pfam 190.387216 Domain of unknown function DUF221 No confident structure predictions are available.
    3 View Details [515..588] deduced N/A No confident structure predictions are available.
    4 View Details [589..782] MSA 4.180958 View MSA. No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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