YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YLR241W
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Non-Cytoplasmic	1	34	0.84
Transmembrane Helix	35	55	0.89
Cytoplasmic	56	115	0.88
Transmembrane Helix	116	137	0.85
Non-Cytoplasmic	138	180	0.93
Transmembrane Helix	181	202	0.90
Cytoplasmic	203	436	0.97
Transmembrane Helix	437	460	0.90
Non-Cytoplasmic	461	485	0.86
Transmembrane Helix	486	507	0.82
Cytoplasmic	508	530	0.84
Transmembrane Helix	531	553	0.86
Non-Cytoplasmic	554	579	0.92
Transmembrane Helix	580	604	0.85
Cytoplasmic	605	621	0.88
Transmembrane Helix	622	642	0.90
Non-Cytoplasmic	643	648	0.67
Transmembrane Helix	649	669	0.84
Cytoplasmic	670	684	0.91
Transmembrane Helix	685	706	0.88
Non-Cytoplasmic	707	711	0.70
Transmembrane Helix	712	732	0.84
Cytoplasmic	733	782	0.89

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSYIERLKS AASYLDTVPD EHHDFRKPTA KVVTTQLTIA TSLGIFALLS FSILLKKWPR  60
   61 LYASRRYKDD GNLRLPSWNQ SSLFGWLTVL YKIRDEQILE YAGLDAYVFL SFFKMCIKLL 120
  121 SIFCFFSVCV ISPVRYHFTG KIDDGNDDDD SESSLIHLVK RIVEGSGDGD NHSAPERTNV 180
  181 YLWMYVLFTY FFTFIAIKMA VAETKHVVST RQAYLGKQNT ITDRTIRLSG IPIELRDSEA 240
  241 LKTRIEQLKI GTVSSITICR EWGPLNKLFH CRKKILKNLE LKYSECPREL RTRQPYSENY 300
  301 HLLGNEQSGA VTHGENVPSS NNNDEDTILY SQISLGERPK MKIGYRGIFG KEVDAIEYLE 360
  361 QQLKFIDAEI IEARKQHYSA TPTAFVTMDS VANAQMAAQA VLDPRVHYFI TRLAPAPHDI 420
  421 KWDHVCLSRK DRLTKVYSTT VFIGLSSLFL VIPVSYLATL LNLKTLSKFW PSVGQLLKDH 480
  481 QWAANIVTGL LPTYLFTLLN FGIPYFYEYL TSYQGLVSYS EEEISLVSKN FFYIFVNLFL 540
  541 VFTLAGTASN YWAYLSDTTK IAYQLATSVK EFSLFYVDLI ILQGIGMFPF KLLLVGSLIG 600
  601 FPLVKIKAKT PRQRNELYNP PIFNFGLQLP QPILILIITL IYSVMSTKIL TSGLAYFIIG 660
  661 FYVYKYQLIF ATDHLPHSTG KVWPLIFRRI IVGLLLFQLT MTGTLAGFEG GWVLSSCLFP 720
  721 LPVVTLCFLY DFEKNYLPLS KYIALSSIRE YERDNSTVNS ANEEESYAYP YAVSELEGPM 780
  781 LD