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Protein Overview: VTH2

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)
View Run ASF1 3906: TAP-tagged Green EM, et al (2005)
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run VAM3 Sample: HX12 - trans-SNARE complex formation and fusion are inhibited (control). Hao Xu, et al. (2010)
View Run VAM3 Sample: HX13 - trans-SNARE complex forms but fusion is blocked. Hao Xu, et al. (2010)
View Run MLP2 #31 Asynchronous Prep (Protease cleavage) Keck JM, et al. (2011)
View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #14 Mitotic Prep2-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #30 Asynchronous Prep6-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data VTH2 Huh WK, et al. (2003)

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..182] MSA 1.005938 View MSA. No confident structure predictions are available.
2 View Details [183..536] deduced N/A No confident structure predictions are available.
3 View Details [537..722] MSA 1.007947 View MSA. No confident structure predictions are available.
4 View Details [723..1398] MSA 7.017001 View MSA. No confident structure predictions are available.
5 View Details [1399..1549] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3 No functions predicted.
4
Term Confidence Notes
  • hydrolase activity
  • 1.41591334858024 bayes_pls_golite062009
  • ubiquitin-protein ligase activity
  • 1.31047753739918 bayes_pls_golite062009
  • binding
  • 1.27390601147347 bayes_pls_golite062009
  • small conjugating protein ligase activity
  • 1.24376651680335 bayes_pls_golite062009
  • transporter activity
  • 1.10239137184953 bayes_pls_golite062009
  • transmembrane transporter activity
  • 0.949536954960448 bayes_pls_golite062009
  • clathrin binding
  • 0.86732360976983 bayes_pls_golite062009
  • substrate-specific transporter activity
  • 0.781060752903079 bayes_pls_golite062009
  • peptidase activity
  • 0.685308067211416 bayes_pls_golite062009
  • catalytic activity
  • 0.660976915716016 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
  • 0.660409340901077 bayes_pls_golite062009
  • ion transmembrane transporter activity
  • 0.56446678342098 bayes_pls_golite062009
  • cation transmembrane transporter activity
  • 0.486294295028555 bayes_pls_golite062009
  • channel activity
  • 0.465630241372545 bayes_pls_golite062009
  • passive transmembrane transporter activity
  • 0.465630241372545 bayes_pls_golite062009
  • substrate-specific channel activity
  • 0.455589501590218 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
  • 0.44519612509266 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
  • 0.437060564683891 bayes_pls_golite062009
  • acid-amino acid ligase activity
  • 0.423920288968837 bayes_pls_golite062009
  • potassium channel activity
  • 0.423464159542763 bayes_pls_golite062009
  • cation channel activity
  • 0.406614358442595 bayes_pls_golite062009
  • voltage-gated cation channel activity
  • 0.402494949667906 bayes_pls_golite062009
  • voltage-gated ion channel activity
  • 0.39571309893169 bayes_pls_golite062009
  • ion channel activity
  • 0.395022246697853 bayes_pls_golite062009
  • voltage-gated channel activity
  • 0.387394052239826 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
  • 0.384942719946392 bayes_pls_golite062009
  • protein binding
  • 0.358634999959382 bayes_pls_golite062009
  • voltage-gated potassium channel activity
  • 0.326855275194847 bayes_pls_golite062009
  • ligand-gated channel activity
  • 0.300015711462657 bayes_pls_golite062009
  • ligand-gated ion channel activity
  • 0.300015711462657 bayes_pls_golite062009
  • gated channel activity
  • 0.266124158878986 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
  • 0.258360510712111 bayes_pls_golite062009
  • sugar binding
  • 0.209524155254648 bayes_pls_golite062009
  • monosaccharide binding
  • 0.165171466772385 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 0.0429267214247906 bayes_pls_golite062009
    5 No functions predicted.




    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle