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Protein Overview: LIP2

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run RPA135 No Comments Schneider, DA, et al. (2006)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen MEC3 LIP2 2 Unpublished Fields Lab Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data LIP2 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..109] MSA 1.038992 View MSA. No confident structure predictions are available.
2 View Details [110..267] Pfam 30.481486 Biotin/lipoate A/B protein ligase family No confident structure predictions are available.
3 View Details [268..328] MSA 1.043994 View MSA. Confident ab initio structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • aminoacyl-tRNA ligase activity
  • 4.83057889638134 bayes_pls_golite062009
  • ligase activity, forming aminoacyl-tRNA and related compounds
  • 4.8294067084702 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
  • 4.8294067084702 bayes_pls_golite062009
  • ligase activity
  • 3.51191116674556 bayes_pls_golite062009
  • catalytic activity
  • 1.99372273395202 bayes_pls_golite062009
  • phenylalanine-tRNA ligase activity
  • 1.57827239765705 bayes_pls_golite062009
  • serine-tRNA ligase activity
  • 1.07048505740004 bayes_pls_golite062009
  • glycine-tRNA ligase activity
  • 0.91005913703893 bayes_pls_golite062009
  • threonine-tRNA ligase activity
  • 0.793195358470619 bayes_pls_golite062009
  • binding
  • 0.521863822270226 bayes_pls_golite062009
  • alanine-tRNA ligase activity
  • 0.435766663027965 bayes_pls_golite062009
  • histidine-tRNA ligase activity
  • 0.334773354741163 bayes_pls_golite062009
  • lysine-tRNA ligase activity
  • 0.333541891861949 bayes_pls_golite062009
  • nucleic acid binding
  • 0.281662799812287 bayes_pls_golite062009
  • ATP binding
  • 0.18403217430648 bayes_pls_golite062009
  • adenyl ribonucleotide binding
  • 0.145955341735342 bayes_pls_golite062009
  • transcription regulator activity
  • 0.134753238769136 bayes_pls_golite062009
  • adenyl nucleotide binding
  • 0.127823774098159 bayes_pls_golite062009
  • DNA binding
  • 0.0309732052586011 bayes_pls_golite062009
  • protein binding
  • 0.0101455326199739 bayes_pls_golite062009
    3 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle