| General Information: |
|
| Name(s) found: |
APL2 /
YKL135C
[SGD]
|
| Description(s) found:
Found 25 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 726 amino acids |
Gene Ontology: |
|
| Cellular Component: |
AP-1 adaptor complex
[IPI ][ISS]
|
| Biological Process: |
vesicle-mediated transport
[IPI][ISS]
Golgi to vacuole transport [IMP ]
|
| Molecular Function: |
clathrin binding
[IPI][ISS]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MPPLDKRIKK FLKDSIRIAP KISGKGELSE LRTGLVSQYP QTRKDAIKKT IQQMTLGKDV 60
61 SSLFPDVLKN IATIDVEQKK LVYLYVMNYA ETHPELCILA VNTFITDAQD PNPLIRCMAI 120
121 RTMSMIRVDK ILEYIETPLR RTLHDDNAYV RKTAVICVAK LFQLNKDLCV ELGVVEDLVN 180
181 ALDDSNPLVI ANATAALIEI HNMDMDAVDL SSLIQSHVSQ FLLALNECTE WARIIILGTL 240
241 SEYSAKDSLE AQDIIDRVTA HLQHVNPAVV LATIKVIVRN LPQIEYSSNS LIMKRLSSAF 300
301 VSLMSTPPEM QYVALKNIRI ILEKYPELLT KELRIFYVKF NDPLYVKLEK IDILVRLVDP 360
361 SNLKQCTLLL TELKEYAMEY EPEFVSRAIQ ALSQLGIKYA QESFVSKVLD ILLELLERQD 420
421 TIKDDCCISL CDLLRHCPGN DKMAKQVCAV FNTWSNPEVL LQSDIAKCNY VWLLGQHPNN 480
481 FSDLESKINI FIENFVQEEA LTQMSLLMTI VRLHATLTGS MLQSVLELAT QQTHELDVRD 540
541 MAMMYWRCLS MPNNESLVND LCQNKLPMIS NTLEKFSPEV LEKLLMELGT ISSIYFKPDS 600
601 NRRKGKKYVQ NIVKGKHIEE LESMAKNEIS SKANDDVLLD FDERDDVTNT NAGMLNTLTT 660
661 LGDLDDLFDF GPSEDATQIN TNDTKAVQGL KELKLGGDSN GISSGGKNNP DVSGGNIVSQ 720
721 DLLDLF |
| PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS | |
| View Details | Riffle et al. (2010) (Unpublished Data) |
|
APL2 APL4 APM1 APM2 APS1 YFL034W |
| View Details | (MIPS) Mewes HW, et al. (2004) |
|
APL2 APL4 APM1 APS1 |
| View Details | Krogan NJ, et al. (2006) |
|
APL2 APL4 APM1 APM2 APS1 CST26 GAL10 IRC6 YFL034W |
| View Details | Gavin AC, et al. (2006) |
|
APL2 APL4 APM1 APM2 APS1 |
| View Details | Gavin AC, et al. (2002) |
|
APL2 APL4 APM1 APM2 APS1 MIS1 RPA135 |
| View Details | Ho Y, et al. (2002) |
|
APL2 APL4 APM1 BRX1 CIC1 KRI1 KRR1 NMA1 NOG1 NOP4 PAB1 PWP1 RCL1 TIF6 TUF1 |
| View Details | Qiu et al. (2008) |
|
APL2 APL4 APM1 APM2 APS1 ENT5 |
The following runs contain data for this protein:
| BAIT | COMMENTS | PUBLICATION | |
| View Run | sample cbf3 from feb 2005 | Sandall S, et all (2006) | |
| View Run | 3912: TAP-tagged, strain background includes hpc2(delta) | Green EM, et al (2005) | |
| View Run | No Comments | Schneider, DA, et al. (2006) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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| PROTEIN(S) | PUBLICATION | |
| View Data |
|
Huh WK, et al. (2003) |
| View Data |
|
Huh WK, et al. (2003) |
Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..103] |  |
1164.0 | Adaptin beta subunit N-terminal fragment |
| 2 | View Details | [104..210] | |
1164.0 | Adaptin beta subunit N-terminal fragment |
| 3 | View Details | [211..345] [577..633] |
|
1164.0 | Adaptin beta subunit N-terminal fragment |
| 4 | View Details | [346..440] | |
1164.0 | Adaptin beta subunit N-terminal fragment |
| 5 | View Details | [441..576] | |
1164.0 | Adaptin beta subunit N-terminal fragment |
| 6 | View Details | [634..726] | |
N/A | No confident structure predictions are available. |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)