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Protein Overview: SPO23

General Information:
Name(s) found: SPO23 / YBR250W [SGD]
Description(s) found:
Found 29 descriptions.
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  • Protein of unknown function; associates with meiosis-specific protein Spo1p [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 523 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: meiosis [IMPLink to PubMed article][IPILink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFSSSSSSL NSEVSQVFSE NISSRSTTLT ESSTQSEIRQ HFGNEDFSGE LPKKLIQLKK  60
   61 LKNGGTTIKK AKEDLEYCYD SLRLYENPYV TSSVDKKCGY SIELYLDNKY KTLMFSDLQL 120
  121 NADYPLYYDS SLDNISTNVE RERATPLQIK GKIRINIDRE DQALLITSHS ISLKCFTKEY 180
  181 ACFVNSETSK NSYSDKIIKE LNHTEFFESS TYPKQQLRVI HHSLNDKKIL LTKGTYDYPF 240
  241 TFTLQANTFP ASFSSFFGKT HFRIESLTTI MRIPSKPKNL LKFLKNESFT DKIILTEEIK 300
  301 VKRVLPSTSM LKFETFQLRS YNTASEIVVS VIGNSKLIEI GMPFQMILSI TKTDSSIELQ 360
  361 EASLAVAQRM AIPSIDLKTK KILREPYIKK SEYLLRTVES QSFDSDKTIF GFCFDDVVIP 420
  421 TYADGLPSWF KTFYCEPSSF YPNHAALKVT HLLLFRITYS RNELVEGLEM KKNYRITVNF 480
  481 PILVGDSDIS TSSLLPKYEK FENISDLQDE PPLYSMVAGE NSL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run RPA135 No Comments Schneider, DA, et al. (2006)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen SPO23 APL2 2 Unpublished Fields Lab Data
    View Screen SPO1 SPO23 2 Uetz P, et al. (2000)

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..523] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.67342091205891 bayes_pls_golite062009
  • protein binding
    		•  1.48312854639435 bayes_pls_golite062009


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle